RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MRFAP1L1Q96HT8 127 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 SLC39A2Q9NP94 309 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
BDNF-218ENST00000533246 ALKQ9UM73 1620 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 NPHP4O75161 1426 aaPredicted RBP13.63□□□□□ -0.23
BDNF-218ENST00000533246 HARSP12081 509 aaKnown RBP13.63□□□□□ -0.23
BDNF-218ENST00000533246 MAGEA1P43355 309 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 STRBPQ96SI9 672 aaKnown RBP13.63□□□□□ -0.23
BDNF-218ENST00000533246 NAPGQ99747 312 aaPredicted RBP13.63□□□□□ -0.23
BDNF-218ENST00000533246 ZNF804BA4D1E1 1349 aa13.63□□□□□ -0.23
BDNF-218ENST00000533246 HSF2BPO75031 334 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 UBE4AQ14139 1066 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 TBC1D10CQ8IV04 446 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 TBC1D5Q92609 795 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
BDNF-218ENST00000533246 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 ADCY7P51828 1080 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 RBM6P78332 1123 aaKnown RBP13.62□□□□□ -0.23
BDNF-218ENST00000533246 RRAGAQ7L523 313 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 TRIM31Q9BZY9 425 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 ATG3Q9NT62 314 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 DONSONQ9NYP3 566 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 A0A0G2JLW4 131 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 FRMD3A2A2Y4 597 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 CYP26C1Q6V0L0 522 aa13.62□□□□□ -0.23
BDNF-218ENST00000533246 A0A1W2PQ27 194 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 A0A1W2PQ64 194 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 A0A1W2PQD8 194 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 BACH1O14867 736 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 BTDP43251 543 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 POLR3EQ9NVU0 708 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 SH2B2O14492 632 aaPredicted RBP13.61□□□□□ -0.23
BDNF-218ENST00000533246 PSMD2Q13200 908 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 NAA30Q147X3 362 aaPredicted RBP13.61□□□□□ -0.23
BDNF-218ENST00000533246 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 JAKMIP2Q96AA8 810 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 E9PCH4 1651 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 MED23Q9ULK4 1368 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 CCDC25Q86WR0 208 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 TUBB4AP04350 444 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 PRDX5P30044 214 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 PSEN1P49768 467 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 TTC19Q6DKK2 380 aaPredicted RBP13.61□□□□□ -0.23
BDNF-218ENST00000533246 TMTC1Q8IUR5 882 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 ARPP21Q9UBL0 812 aaPredicted RBP13.61□□□□□ -0.23
BDNF-218ENST00000533246 PPP2R2CQ9Y2T4 447 aa13.61□□□□□ -0.23
BDNF-218ENST00000533246 UNC13BO14795 1591 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 CETN3O15182 167 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 CYP4A11Q02928 519 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 CYB5R4Q7L1T6 521 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 CRB1P82279 1406 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 KCNJ18B7U540 433 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 CYP2D6P10635 497 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 SLC16A2P36021 539 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 KCNJ12Q14500 433 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.6□□□□□ -0.23
BDNF-218ENST00000533246 MRFAP1Q9Y605 127 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 IFNAR1P17181 557 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 MMP14P50281 582 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 NBPF20Q3BBV1 942 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 NSMFQ6X4W1 530 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 SHROOM2Q13796 1616 aa13.6□□□□□ -0.23
BDNF-218ENST00000533246 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 KCNQ2O43526 872 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 CASP14P31944 242 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 PLCB3Q01970 1234 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 MORC3Q14149 939 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 OR8K1Q8NGG5 319 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 CCDC169A6NNP5 214 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 NMT2O60551 498 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 KIF4AO95239 1232 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
BDNF-218ENST00000533246 VAV2P52735 878 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 SELENOOQ9BVL4 669 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 ENC1O14682 589 aa13.59□□□□□ -0.23
BDNF-218ENST00000533246 PPP1R12AO14974 1030 aaPredicted RBP13.59□□□□□ -0.23
BDNF-218ENST00000533246 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
BDNF-218ENST00000533246 EZRP15311 586 aaKnown RBP13.59□□□□□ -0.23
BDNF-218ENST00000533246 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
BDNF-218ENST00000533246 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms