RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 NCOR1O75376 2440 aa13.7□□□□□ -0.22
TRAPPC4-213ENST00000533149 HMMRO75330 724 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 PGK1P00558 417 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 ERCC3P19447 782 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 PPP4CP60510 307 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 COG2Q14746 738 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 RAB3GAP1Q15042 981 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 TMEM240Q5SV17 173 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 PSRC1Q6PGN9 363 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 TMEM199Q8N511 208 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 MAML3Q96JK9 1138 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 SPATC1LQ9H0A9 340 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 EPHX3Q9H6B9 360 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 STARD7Q9NQZ5 370 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 PA2G4Q9UQ80 394 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
TRAPPC4-213ENST00000533149 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 HERVK_113Q902F9 699 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 MTIF3Q9H2K0 278 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
TRAPPC4-213ENST00000533149 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
TRAPPC4-213ENST00000533149 GPR37L1O60883 481 aa13.67□□□□□ -0.22
TRAPPC4-213ENST00000533149 ARID4AP29374 1257 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-213ENST00000533149 ALYREFQ86V81 257 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-213ENST00000533149 CABP5Q9NP86 173 aa13.67□□□□□ -0.22
TRAPPC4-213ENST00000533149 SAP30BPQ9UHR5 308 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-213ENST00000533149 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
TRAPPC4-213ENST00000533149 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 ERC2O15083 957 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 UQCRFS1P1P0C7P4 283 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 FCER1AP12319 257 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 AKR1A1P14550 325 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 CSF2RAP15509 400 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 KCNQ1P51787 676 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 ACLYP53396 1101 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 TFF2Q03403 129 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 TFCP2Q12800 502 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 POLA2Q14181 598 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 SKIV2LQ15477 1246 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 ZNF365Q70YC5 407 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 SSH3Q8TE77 659 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
TRAPPC4-213ENST00000533149 SRGAP3O43295 1099 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 IGSF3O75054 1194 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 MTX1Q13505 466 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 PLS1Q14651 629 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 CERKLQ49MI3 558 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 EHD4Q9H223 541 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 SERPINB13Q9UIV8 391 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 ELP1O95163 1332 aa13.65□□□□□ -0.22
TRAPPC4-213ENST00000533149 APBB1O00213 710 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 ADAMTS4O75173 837 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 ACRP10323 421 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 MCAMP43121 646 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 SKAP1Q86WV1 359 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 TINF2Q9BSI4 451 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 COG5Q9UP83 839 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 FGBP02675 491 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 NUCB1Q02818 461 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 SNX27Q96L92 541 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-213ENST00000533149 BDP1A6H8Y1 2624 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 MYO9BQ13459 2157 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 GTPBP6O43824 516 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 SLC25A27O95847 323 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 ZNF865P0CJ78 1059 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 CDK7P50613 346 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 KCNA10Q16322 511 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 ADGRA1Q86SQ6 560 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 KLHDC9Q8NEP7 349 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 MMP19Q99542 508 aa13.63□□□□□ -0.23
TRAPPC4-213ENST00000533149 SYNRGQ9UMZ2 1314 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 FOCADQ5VW36 1801 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 TLL1O43897 1013 aa13.62□□□□□ -0.23
TRAPPC4-213ENST00000533149 TAL1P17542 331 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms