RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 TMX2Q9Y320 296 aa23.52■■□□□ 1.36
GSDMD-212ENST00000533063 OTOFQ9HC10 1997 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 NDUFB10O96000 172 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 SMARCA1P28370 1054 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 SLFN13Q68D06 897 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 KRT26Q7Z3Y9 468 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 PIBF1Q8WXW3 757 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 HOOK2Q96ED9 719 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 UBA5Q9GZZ9 404 aa23.51■■□□□ 1.35
GSDMD-212ENST00000533063 AKAP17AQ02040 695 aaKnown RBP23.5■■□□□ 1.35
GSDMD-212ENST00000533063 PFKFB3Q16875 520 aaPredicted RBP23.5■■□□□ 1.35
GSDMD-212ENST00000533063 TTBK2Q6IQ55 1244 aa23.5■■□□□ 1.35
GSDMD-212ENST00000533063 KCTD1Q719H9 257 aa23.5■■□□□ 1.35
GSDMD-212ENST00000533063 KLRG1Q96E93 195 aa23.5■■□□□ 1.35
GSDMD-212ENST00000533063 RIOX1Q9H6W3 641 aa23.5■■□□□ 1.35
GSDMD-212ENST00000533063 GPCPD1Q9NPB8 672 aa23.5■■□□□ 1.35
GSDMD-212ENST00000533063 KIF28PB7ZC32 967 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 SUPT20HL1Q3ZLR7 823 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 DCAF4Q8WV16 495 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 WRNIP1Q96S55 665 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 ARHGEF10LQ9HCE6 1279 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 KCNJ14Q9UNX9 436 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 POTEIP0CG38 1075 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 POTEJP0CG39 1038 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 SCG2P13521 617 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 KIF23Q02241 960 aaPredicted RBP23.49■■□□□ 1.35
GSDMD-212ENST00000533063 EAPPQ56P03 285 aaPredicted RBP23.49■■□□□ 1.35
GSDMD-212ENST00000533063 GPATCH4Q5T3I0 446 aaKnown RBP23.49■■□□□ 1.35
GSDMD-212ENST00000533063 ZKSCAN4Q969J2 545 aaPredicted RBP23.49■■□□□ 1.35
GSDMD-212ENST00000533063 GMCL1Q96IK5 515 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 GINM1Q9NU53 330 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 VPS54Q9P1Q0 977 aa23.49■■□□□ 1.35
GSDMD-212ENST00000533063 DNM1Q05193 864 aaKnown RBP23.48■■□□□ 1.35
GSDMD-212ENST00000533063 NUP88Q99567 741 aaPredicted RBP23.48■■□□□ 1.35
GSDMD-212ENST00000533063 ZSCAN16Q9H4T2 348 aaPredicted RBP23.48■■□□□ 1.35
GSDMD-212ENST00000533063 USP2O75604 605 aaPredicted RBP23.47■■□□□ 1.35
GSDMD-212ENST00000533063 MMP1P03956 469 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 SLC1A4P43007 532 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 MCTP1Q6DN14 999 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 USP48Q86UV5 1035 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 PNMA8AQ86V59 439 aaPredicted RBP23.47■■□□□ 1.35
GSDMD-212ENST00000533063 RBM27Q9P2N5 1060 aaKnown RBP23.47■■□□□ 1.35
GSDMD-212ENST00000533063 ATP6V1DQ9Y5K8 247 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 RAD21O60216 631 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 NPY5RQ15761 445 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 CCDC96Q2M329 555 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 TYW1BQ6NUM6 668 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 SCYL3Q8IZE3 742 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 SPICE1Q8N0Z3 855 aa23.47■■□□□ 1.35
GSDMD-212ENST00000533063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.47■■□□□ 1.35
GSDMD-212ENST00000533063 SLC16A2P36021 539 aa23.46■■□□□ 1.35
GSDMD-212ENST00000533063 NBR1Q14596 966 aa23.46■■□□□ 1.35
GSDMD-212ENST00000533063 PHF20Q9BVI0 1012 aa23.46■■□□□ 1.35
GSDMD-212ENST00000533063 CNPY2Q9Y2B0 182 aa23.46■■□□□ 1.35
GSDMD-212ENST00000533063 PRKG1Q13976 671 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 ADGRF4Q8IZF3 695 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 GPKOWQ92917 476 aaPredicted RBP eCLIP23.45■■□□□ 1.34
GSDMD-212ENST00000533063 PIGSQ96S52 555 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 VCPKMTQ9H867 229 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 JMJD4Q9H9V9 463 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 VAT1LQ9HCJ6 419 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 U2AF2P26368 475 aaKnown RBP eCLIP23.45■■□□□ 1.34
GSDMD-212ENST00000533063 TRIM29Q14134 588 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 WWC2Q6AWC2 1192 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 MTMR8Q96EF0 704 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 CDCA5Q96FF9 252 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 GDPD2Q9HCC8 539 aa23.45■■□□□ 1.34
GSDMD-212ENST00000533063 PTPRAP18433 802 aa23.44■■□□□ 1.34
GSDMD-212ENST00000533063 HOMER1Q86YM7 354 aa23.44■■□□□ 1.34
GSDMD-212ENST00000533063 GOPCQ9HD26 462 aa23.44■■□□□ 1.34
GSDMD-212ENST00000533063 BTBD18B2RXH4 712 aa23.43■■□□□ 1.34
GSDMD-212ENST00000533063 ADAMTS3O15072 1205 aa23.43■■□□□ 1.34
GSDMD-212ENST00000533063 BMP3P12645 472 aa23.43■■□□□ 1.34
GSDMD-212ENST00000533063 ZYXQ15942 572 aaKnown RBP23.43■■□□□ 1.34
GSDMD-212ENST00000533063 NOL9Q5SY16 702 aaKnown RBP23.43■■□□□ 1.34
GSDMD-212ENST00000533063 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.43■■□□□ 1.34
GSDMD-212ENST00000533063 OXER1Q8TDS5 423 aa23.43■■□□□ 1.34
GSDMD-212ENST00000533063 RRP36Q96EU6 259 aaKnown RBP23.43■■□□□ 1.34
GSDMD-212ENST00000533063 RRAGCQ9HB90 399 aa23.43■■□□□ 1.34
GSDMD-212ENST00000533063 USP17L10C9JJH3 530 aa23.43■■□□□ 1.34
GSDMD-212ENST00000533063 DIS3L2Q8IYB7 885 aaKnown RBP23.43■■□□□ 1.34
GSDMD-212ENST00000533063 LMBRD1Q9NUN5 540 aa23.43■■□□□ 1.34
GSDMD-212ENST00000533063 DDX11L8A8MPP1 907 aa23.42■■□□□ 1.34
GSDMD-212ENST00000533063 STXBP3O00186 592 aa23.42■■□□□ 1.34
GSDMD-212ENST00000533063 DGKZQ13574 1117 aa23.42■■□□□ 1.34
GSDMD-212ENST00000533063 BTNL9Q6UXG8 535 aa23.42■■□□□ 1.34
GSDMD-212ENST00000533063 KIAA1683Q9H0B3 1180 aa23.42■■□□□ 1.34
GSDMD-212ENST00000533063 SH2D4AQ9H788 454 aa23.42■■□□□ 1.34
GSDMD-212ENST00000533063 BARHL2Q9NY43 387 aa23.42■■□□□ 1.34
GSDMD-212ENST00000533063 PPP1R11O60927 126 aaPredicted RBP23.41■■□□□ 1.34
GSDMD-212ENST00000533063 XBP1P17861 261 aa23.41■■□□□ 1.34
GSDMD-212ENST00000533063 NR5A1Q13285 461 aa23.41■■□□□ 1.34
GSDMD-212ENST00000533063 FAM83BQ5T0W9 1011 aa23.41■■□□□ 1.34
GSDMD-212ENST00000533063 BRAPQ7Z569 592 aa23.41■■□□□ 1.34
GSDMD-212ENST00000533063 WDR18Q9BV38 432 aa23.41■■□□□ 1.34
GSDMD-212ENST00000533063 SH3GLB2Q9NR46 395 aa23.41■■□□□ 1.34
GSDMD-212ENST00000533063 PTPRFP10586 1907 aa23.41■■□□□ 1.34
GSDMD-212ENST00000533063 TMEM232C9JQI7 657 aa23.4■■□□□ 1.34
GSDMD-212ENST00000533063 VGLL4Q14135 290 aa23.4■■□□□ 1.34
GSDMD-212ENST00000533063 HEATR3Q7Z4Q2 680 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms