RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
CPSF1-210ENST00000532935 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 IL25Q9H293 177 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 CWC22Q9HCG8 908 aaKnown RBP18.2■□□□□ 0.5
CPSF1-210ENST00000532935 TOMM22Q9NS69 142 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 FBXO28Q9NVF7 368 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 RAD50Q92878 1312 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 CHMLP26374 656 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 UBXN2AP68543 259 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 MTFR1Q15390 333 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 RRP12Q5JTH9 1297 aaKnown RBP18.19■□□□□ 0.5
CPSF1-210ENST00000532935 AKNAD1Q5T1N1 836 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 GMCL1P1Q8NEA9 526 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 STAG1Q8WVM7 1258 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 NUDT12Q9BQG2 462 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 SPATC1LQ9H0A9 340 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
CPSF1-210ENST00000532935 ZNF213O14771 459 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 NMT2O60551 498 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 INHAP05111 366 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 PCP11498 1178 aaKnown RBP18.18■□□□□ 0.5
CPSF1-210ENST00000532935 MORN1Q5T089 497 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 WDR78Q5VTH9 848 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 MFSD6Q6ZSS7 791 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 RUFY2Q8WXA3 655 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
CPSF1-210ENST00000532935 ADAMTS5Q9UNA0 930 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 STX8Q9UNK0 236 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 ZNF236Q9UL36 1845 aa18.18■□□□□ 0.5
CPSF1-210ENST00000532935 CYP2B6P20813 491 aa18.17■□□□□ 0.5
CPSF1-210ENST00000532935 PLS1Q14651 629 aa18.17■□□□□ 0.5
CPSF1-210ENST00000532935 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
CPSF1-210ENST00000532935 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
CPSF1-210ENST00000532935 USP6NLQ92738 828 aa18.17■□□□□ 0.5
CPSF1-210ENST00000532935 SLF1Q9BQI6 1058 aa18.17■□□□□ 0.5
CPSF1-210ENST00000532935 RNF41Q9H4P4 317 aaPredicted RBP18.17■□□□□ 0.5
CPSF1-210ENST00000532935 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
CPSF1-210ENST00000532935 VWA5AO00534 786 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 XRCC5P13010 732 aaKnown RBP18.16■□□□□ 0.5
CPSF1-210ENST00000532935 CCL5P13501 91 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 EN2P19622 333 aaPredicted RBP18.16■□□□□ 0.5
CPSF1-210ENST00000532935 PTPREP23469 700 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 RGS2P41220 211 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 NOVP48745 357 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 SKAP1Q86WV1 359 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 SHCBP1Q8NEM2 672 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 CCDC136Q96JN2 1154 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 IVNS1ABPQ9Y6Y0 642 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 NEDD4P46934 1319 aa18.16■□□□□ 0.5
CPSF1-210ENST00000532935 PDE4DIPQ5VU43 2346 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 SLC15A5A6NIM6 579 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 HMGCRP04035 888 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 NEFLP07196 543 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 BMP3P12645 472 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 ERCC3P19447 782 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 MAP2K5Q13163 448 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 IMMTQ16891 758 aaKnown RBP18.15■□□□□ 0.5
CPSF1-210ENST00000532935 REPS2Q8NFH8 660 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 TRIB2Q92519 343 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 APBA2Q99767 749 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 RNF208Q9H0X6 261 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 UNC93B1Q9H1C4 597 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 PLXNA1Q9UIW2 1896 aa18.15■□□□□ 0.5
CPSF1-210ENST00000532935 SGSM2O43147 1006 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 GRB14Q14449 540 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 NCAPG2Q86XI2 1143 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 TRMT44Q8IYL2 757 aaKnown RBP18.14■□□□□ 0.49
CPSF1-210ENST00000532935 PRPF38AQ8NAV1 312 aaKnown RBP18.14■□□□□ 0.49
CPSF1-210ENST00000532935 NKX2-3Q8TAU0 364 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 ESR2Q92731 530 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 GMCL1Q96IK5 515 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 MROH8Q9H579 483 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 FEM1BQ9UK73 627 aa18.14■□□□□ 0.49
CPSF1-210ENST00000532935 STRNO43815 780 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 SLC25A27O95847 323 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 GJB1P08034 283 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 MCCP23508 829 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 SLC1A4P43007 532 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 NT5C2P49902 561 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 KIFC2Q96AC6 838 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
CPSF1-210ENST00000532935 ZNF214Q9UL59 606 aaPredicted RBP18.13■□□□□ 0.49
CPSF1-210ENST00000532935 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
CPSF1-210ENST00000532935 TOP1P11387 765 aaKnown RBP18.12■□□□□ 0.49
CPSF1-210ENST00000532935 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
CPSF1-210ENST00000532935 STAT3P40763 770 aa18.12■□□□□ 0.49
CPSF1-210ENST00000532935 PTH1RQ03431 593 aa18.12■□□□□ 0.49
CPSF1-210ENST00000532935 TRIM32Q13049 653 aa18.12■□□□□ 0.49
CPSF1-210ENST00000532935 CCL14Q16627 93 aa18.12■□□□□ 0.49
CPSF1-210ENST00000532935 RIOX2Q8IUF8 465 aa18.12■□□□□ 0.49
CPSF1-210ENST00000532935 TMEM47Q9BQJ4 181 aa18.12■□□□□ 0.49
CPSF1-210ENST00000532935 ISY1Q9ULR0 285 aaKnown RBP18.12■□□□□ 0.49
CPSF1-210ENST00000532935 ZBED4O75132 1171 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 KDM4AO75164 1064 aa18.11■□□□□ 0.49
CPSF1-210ENST00000532935 HOXC6P09630 235 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms