RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 hCG_1984214I3L0E3 225 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 SPOPO43791 374 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 CALCOCO2Q13137 446 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 PPP1R7Q15435 360 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 ZNF713Q8N859 430 aaPredicted RBP11.9□□□□□ -0.5
COLCA1-203ENST00000532918 ATP6V0A1Q93050 837 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 CDC42BPGQ6DT37 1551 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
COLCA1-203ENST00000532918 GRIN3BO60391 1043 aa11.9□□□□□ -0.51
COLCA1-203ENST00000532918 ABCD1P33897 745 aa11.9□□□□□ -0.51
COLCA1-203ENST00000532918 TYRO3Q06418 890 aa11.9□□□□□ -0.51
COLCA1-203ENST00000532918 PRR16Q569H4 304 aa11.9□□□□□ -0.51
COLCA1-203ENST00000532918 FBF1Q8TES7 1133 aa11.9□□□□□ -0.51
COLCA1-203ENST00000532918 IQCDQ96DY2 449 aa11.9□□□□□ -0.51
COLCA1-203ENST00000532918 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 FAM160B2Q86V87 743 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 CCDC63Q8NA47 563 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 C16orf45Q96MC5 204 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 ERCC5P28715 1186 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 TNNC1P63316 161 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 PAK1Q13153 545 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 NLRP10Q86W26 655 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 CCDC94Q9BW85 323 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 TM6SF1Q9BZW5 370 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 POLGP54098 1239 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 LRRC24Q50LG9 513 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 TTC14Q96N46 770 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 MYL10Q9BUA6 226 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 ZNF215Q9UL58 517 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 NOC2LQ9Y3T9 749 aaKnown RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 DCUN1D2Q6PH85 259 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 MLKLQ8NB16 471 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 DDX23Q9BUQ8 820 aaKnown RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 NSRP1Q9H0G5 558 aaKnown RBP11.89□□□□□ -0.51
COLCA1-203ENST00000532918 ZMYM4Q5VZL5 1548 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 TNS3Q68CZ2 1445 aa11.89□□□□□ -0.51
COLCA1-203ENST00000532918 SDR42E1Q8WUS8 393 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 TNKSO95271 1327 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 SKILP12757 684 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 CCND2P30279 289 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 CLUL1Q15846 466 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 NEK8Q86SG6 692 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 GPR161Q8N6U8 529 aaKnown RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 UBL4BQ8N7F7 174 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 PCDHA1Q9Y5I3 950 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 FANCBQ8NB91 859 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 GSDMBQ8TAX9 411 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 PCDHA12Q9UN75 941 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 CCDC160A6NGH7 325 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 DMP1Q13316 513 aaPredicted RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 SND1Q7KZF4 910 aaKnown RBP eCLIP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 APOBEC3FQ8IUX4 373 aaKnown RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 NUCKS1Q9H1E3 243 aaKnown RBP11.88□□□□□ -0.51
COLCA1-203ENST00000532918 SUGCTQ9HAC7 445 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 ABCC4O15439 1325 aa11.88□□□□□ -0.51
COLCA1-203ENST00000532918 C21orf2O43822 256 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
COLCA1-203ENST00000532918 ALDH3A1P30838 453 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 GABPAQ06546 454 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 KRT222Q8N1A0 295 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 NCOA5Q9HCD5 579 aaKnown RBP11.87□□□□□ -0.51
COLCA1-203ENST00000532918 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 A0A1B0GVL5 298 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 SCG2P13521 617 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 PHKA1P46020 1223 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 POLA2Q14181 598 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 RASA3Q14644 834 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 CCDC6Q16204 474 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 PHKBQ93100 1093 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 VPS54Q9P1Q0 977 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 SRP68Q9UHB9 627 aaKnown RBP11.87□□□□□ -0.51
COLCA1-203ENST00000532918 DDX25Q9UHL0 483 aaKnown RBP11.87□□□□□ -0.51
COLCA1-203ENST00000532918 ABCC3O15438 1527 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 SYNMO15061 1565 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 BMP3P12645 472 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 DYMQ7RTS9 669 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 POLR2DO15514 142 aaKnown RBP11.87□□□□□ -0.51
COLCA1-203ENST00000532918 SH3BP5O60239 455 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 CCDC26Q8TAB7 109 aa11.87□□□□□ -0.51
COLCA1-203ENST00000532918 KIF1BO60333 1816 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms