RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 TPCN1Q9ULQ1 816 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
CTNND1-233ENST00000532787 RGS12O14924 1447 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 PASKQ96RG2 1323 aa8.36□□□□□ -1.07
CTNND1-233ENST00000532787 A0A1W2PQ27 194 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 A0A1W2PQ64 194 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 A0A1W2PQD8 194 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 CHRNA2Q15822 529 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 MUM1L1Q5H9M0 696 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 SPATA1Q5VX52 437 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 TYW1BQ6NUM6 668 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 REXO1Q8N1G1 1221 aaKnown RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 RETREG2Q8NC44 543 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 TRIM11Q96F44 468 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 DDX27Q96GQ7 796 aaKnown RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 TESK2Q96S53 571 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ZNF277Q9NRM2 450 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ZMYM6O95789 1325 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 SUN1O94901 812 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 PRPF6O94906 941 aaKnown RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ABCD1P33897 745 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 NLRX1Q86UT6 975 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 TSPYL2Q9H2G4 693 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 PDE6BP35913 854 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 AOC3Q16853 763 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 MIER3Q7Z3K6 550 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 C2CD5Q86YS7 1000 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 LRRC8AQ8IWT6 810 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 EFCAB13Q8IY85 973 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 IFT122Q9HBG6 1241 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 GGA1Q9UJY5 639 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 AFG3L2Q9Y4W6 797 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 TTC36A6NLP5 189 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 DDAH1O94760 285 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 PFKFB1P16118 471 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 LONP1P36776 959 aaKnown RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ASPHQ12797 758 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 CCDC93Q567U6 631 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 NOSTRINQ8IVI9 506 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 TTC16Q8NEE8 873 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 MICAL1Q8TDZ2 1067 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 DBNDD2Q9BQY9 259 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 SERTAD1Q9UHV2 236 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 RNF123Q5XPI4 1314 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 PHLPP2Q6ZVD8 1323 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 E7EWF7 191 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 HSPA8P11142 646 aaKnown RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 RPS6KA2Q15349 733 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ANKRD20A4Q4UJ75 823 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ANKRD20A8PQ5CZ79 823 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ANKRD20A2Q5SQ80 823 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 ANKRD20A1Q5TYW2 823 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 SDCCAG3Q96C92 435 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 SPATS2LQ9NUQ6 558 aaKnown RBP8.35□□□□□ -1.07
CTNND1-233ENST00000532787 RIPOR2Q9Y4F9 1068 aa8.35□□□□□ -1.07
CTNND1-233ENST00000532787 CFAP43Q8NDM7 1665 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 SYCP2Q9BX26 1530 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 POLR2BP30876 1174 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 BPIFB4P59827 614 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 RNASE9P60153 205 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 IL9RQ01113 521 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 CASC4Q6P4E1 433 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 SPATA5Q8NB90 893 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 U2AF1L4Q8WU68 220 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 RIOK1Q9BRS2 568 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 DRC3Q9H069 523 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 CNOT10Q9H9A5 744 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 LRRD1A4D1F6 860 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 NOP56O00567 594 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 CHMP2AO43633 222 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 MYL1P05976 194 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 HSPA6P17066 643 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 CDKL2Q92772 493 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 USTQ9Y2C2 406 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 GADD45BO75293 160 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 STAM2O75886 525 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 ATF2P15336 505 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 ATF7P17544 494 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 IPO11Q9UI26 975 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 CD2APQ9Y5K6 639 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 KCNK3O14649 394 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 LMNB1P20700 586 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 SLC1A4P43007 532 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 PDE6CP51160 858 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 EPHB4P54760 987 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 RSPH3Q86UC2 560 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 CCHCR1Q8TD31 782 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 MORC4Q8TE76 937 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 STAG1Q8WVM7 1258 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 TRIM6Q9C030 488 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 ACTR5Q9H9F9 607 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 NCOA5Q9HCD5 579 aaKnown RBP8.34□□□□□ -1.07
CTNND1-233ENST00000532787 CDC23Q9UJX2 597 aa8.34□□□□□ -1.07
CTNND1-233ENST00000532787 IKBKBO14920 756 aa8.33□□□□□ -1.08
CTNND1-233ENST00000532787 CPA1P15085 419 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms