RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 AK2P54819 239 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 METTL13Q8N6R0 699 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 UTYO14607 1347 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 FGAP02671 866 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
CSRP1-215ENST00000532313 YWHAEP62258 255 aaKnown RBP13.07□□□□□ -0.32
CSRP1-215ENST00000532313 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
CSRP1-215ENST00000532313 TSHZ2Q9NRE2 1034 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
CSRP1-215ENST00000532313 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 PLVAPQ9BX97 442 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 DYNLL1P63167 89 aaKnown RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 SPP2Q13103 211 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 ELP3Q9H9T3 547 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 MANSC4A6NHS7 340 aaPredicted RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 RXRAP19793 462 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 NFKBIBQ15653 356 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 KIAA1328Q86T90 577 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 SCG2P13521 617 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 PRPF38AQ8NAV1 312 aaKnown RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 PSMD1Q99460 953 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 ABCB11O95342 1321 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 STX1AQ16623 288 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
CSRP1-215ENST00000532313 FAM167AQ96KS9 214 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 SPAG5Q96R06 1193 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 MMP19Q99542 508 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 MTA3Q9BTC8 594 aa13.06□□□□□ -0.32
CSRP1-215ENST00000532313 CCL15-CCL14A0A0B4J2E2 113 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 CALUO43852 315 aaPredicted RBP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 USO1O60763 962 aaKnown RBP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 SLC25A27O95847 323 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 CCL15Q16663 113 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 NOX5Q96PH1 765 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 MEGF6O75095 1541 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 TXKP42681 527 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 CNNM4Q6P4Q7 775 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 RPS6KC1Q96S38 1066 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 ZBED2Q9BTP6 218 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 NEMFO60524 1076 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 EPB41P11171 864 aaKnown RBP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 INHBEP58166 350 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 STXBP2Q15833 593 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 RNF207Q6ZRF8 634 aa13.05□□□□□ -0.32
CSRP1-215ENST00000532313 INO80BQ9C086 356 aaPredicted RBP13.05□□□□□ -0.32
CSRP1-215ENST00000532313 CSF1RP07333 972 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 UBE2HP62256 183 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 DPF2Q92785 391 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 ERCC4Q92889 916 aaPredicted RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 RFX7Q2KHR2 1363 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 ZNF280CQ8ND82 737 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 RRAGCQ9HB90 399 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 HAUS2Q9NVX0 235 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 MRE11P49959 708 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 GOLGA5Q8TBA6 731 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 ACAD9Q9H845 621 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 MARCKSP29966 332 aaPredicted RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 BIRC3Q13489 604 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 SLC7A3Q8WY07 619 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 PANK2Q9BZ23 570 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 TFIP11Q9UBB9 837 aaKnown RBP13.04□□□□□ -0.32
CSRP1-215ENST00000532313 NDUFB9Q9Y6M9 179 aa13.04□□□□□ -0.32
CSRP1-215ENST00000532313 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
CSRP1-215ENST00000532313 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
CSRP1-215ENST00000532313 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
CSRP1-215ENST00000532313 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
CSRP1-215ENST00000532313 PRDX5P30044 214 aa13.03□□□□□ -0.32
CSRP1-215ENST00000532313 NASPP49321 788 aaPredicted RBP13.03□□□□□ -0.32
CSRP1-215ENST00000532313 NSUN6Q8TEA1 469 aaKnown RBP13.03□□□□□ -0.32
CSRP1-215ENST00000532313 ZNF592Q92610 1267 aa13.03□□□□□ -0.32
CSRP1-215ENST00000532313 DEFB129Q9H1M3 183 aa13.03□□□□□ -0.32
CSRP1-215ENST00000532313 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms