RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 MRE11P49959 708 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 USP14P54578 494 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 CCDC178Q5BJE1 867 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 USP17L2Q6R6M4 530 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 FASTKD5Q7L8L6 764 aaKnown RBP10.99□□□□□ -0.65
NXF1-209ENST00000531474 CHST3Q7LGC8 479 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 BRI3BPQ8WY22 251 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 LARP6Q9BRS8 491 aaKnown RBP10.99□□□□□ -0.65
NXF1-209ENST00000531474 ZSCAN16Q9H4T2 348 aaPredicted RBP10.99□□□□□ -0.65
NXF1-209ENST00000531474 TMX2Q9Y320 296 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 TNKSO95271 1327 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 GREB1LQ9C091 1923 aaPredicted RBP10.98□□□□□ -0.65
NXF1-209ENST00000531474 ERICH2A1L162 156 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 FSD2A1L4K1 749 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
NXF1-209ENST00000531474 LARGE1O95461 756 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 ANTXR2P58335 489 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 COL9A3Q14050 684 aaPredicted RBP10.98□□□□□ -0.65
NXF1-209ENST00000531474 SART3Q15020 963 aaKnown RBP10.98□□□□□ -0.65
NXF1-209ENST00000531474 TMEM67Q5HYA8 995 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 ATL3Q6DD88 541 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 TMTC2Q8N394 836 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 DNAJC5GQ8N7S2 189 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 ENAHQ8N8S7 591 aaPredicted RBP10.98□□□□□ -0.65
NXF1-209ENST00000531474 NECAB1Q8N987 351 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 FAM184AQ8NB25 1140 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 BRF1Q92994 677 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 TMEM87BQ96K49 555 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 TMEM47Q9BQJ4 181 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 EMILIN3Q9NT22 766 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 MTMR7Q9Y216 660 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 THSD7BQ9C0I4 1608 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
NXF1-209ENST00000531474 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
NXF1-209ENST00000531474 TOP1P11387 765 aaKnown RBP10.97□□□□□ -0.65
NXF1-209ENST00000531474 VCAM1P19320 739 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 INHBEP58166 350 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 MOGSQ13724 837 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 WTAPQ15007 396 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 TREML2Q5T2D2 321 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 IFIT1BQ5T764 474 aaKnown RBP10.97□□□□□ -0.65
NXF1-209ENST00000531474 RCSD1Q6JBY9 416 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 DGKHQ86XP1 1220 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 REM2Q8IYK8 340 aaPredicted RBP10.97□□□□□ -0.65
NXF1-209ENST00000531474 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
NXF1-209ENST00000531474 SMARCC2Q8TAQ2 1214 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 MKL1Q969V6 931 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 C12orf42Q96LP6 360 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 TCEANC2Q96MN5 208 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 PTPN18Q99952 460 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 LRRC2Q9BYS8 371 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 SCAND2PQ9GZW5 306 aaPredicted RBP10.97□□□□□ -0.65
NXF1-209ENST00000531474 GZF1Q9H116 711 aaPredicted RBP10.97□□□□□ -0.65
NXF1-209ENST00000531474 VCPKMTQ9H867 229 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 KAT14Q9H8E8 782 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 SYNPO2Q9UMS6 1093 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 MTMR6Q9Y217 621 aa10.97□□□□□ -0.65
NXF1-209ENST00000531474 BTBD19C9JJ37 291 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 F5H6K3 240 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 H3BQV1 296 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 IGF2BP3O00425 579 aaKnown RBP eCLIP10.96□□□□□ -0.65
NXF1-209ENST00000531474 NDUFB10O96000 172 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 PDIA3P30101 505 aaKnown RBP10.96□□□□□ -0.65
NXF1-209ENST00000531474 TM4SF4P48230 202 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 NOVP48745 357 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 ZNF445P59923 1031 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 UBE2HP62256 183 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 KRT85P78386 507 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 KLRC3Q07444 240 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 SEC23AQ15436 765 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 KIAA1755Q5JYT7 1200 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 FOXD4L5Q5VV16 416 aaPredicted RBP10.96□□□□□ -0.65
NXF1-209ENST00000531474 SLFN13Q68D06 897 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 GPAT2Q6NUI2 795 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 CPLX2Q6PUV4 134 aaKnown RBP10.96□□□□□ -0.65
NXF1-209ENST00000531474 ANKRD23Q86SG2 305 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 FAM43AQ8N2R8 423 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 GMCL1P1Q8NEA9 526 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 FOXD4L4Q8WXT5 416 aaPredicted RBP10.96□□□□□ -0.65
NXF1-209ENST00000531474 LPAR1Q92633 364 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 NUP88Q99567 741 aaPredicted RBP10.96□□□□□ -0.65
NXF1-209ENST00000531474 TANGO6Q9C0B7 1094 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 RPAP3Q9H6T3 665 aaPredicted RBP10.96□□□□□ -0.65
NXF1-209ENST00000531474 GPHNQ9NQX3 736 aaPredicted RBP10.96□□□□□ -0.65
NXF1-209ENST00000531474 AGTPBP1Q9UPW5 1226 aa10.96□□□□□ -0.65
NXF1-209ENST00000531474 VPS37CA5D8V6 355 aaPredicted RBP10.95□□□□□ -0.66
NXF1-209ENST00000531474 PDHXO00330 501 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 SH2B2O14492 632 aaPredicted RBP10.95□□□□□ -0.66
NXF1-209ENST00000531474 WDR46O15213 610 aaKnown RBP10.95□□□□□ -0.66
NXF1-209ENST00000531474 CDKL5O76039 1030 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 APOBRQ0VD83 1088 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 STK3Q13188 491 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms