RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 AMOTL1Q8IY63 956 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 STK11IPQ8N1F8 1099 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 LENG1Q96BZ8 264 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-206ENST00000531430 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 TINF2Q9BSI4 451 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 STARD7Q9NQZ5 370 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 FBXO28Q9NVF7 368 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 PHF24Q9UPV7 400 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 CNPY2Q9Y2B0 182 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 CTDP1Q9Y5B0 961 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-206ENST00000531430 FRMPD3Q5JV73 1810 aa11.16□□□□□ -0.62
NEDD8-206ENST00000531430 CYP2D7A0A087X1C5 515 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 A0A1W2PQ45 241 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-206ENST00000531430 A0A1W2PQY0 241 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 PRKAB2O43741 272 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 IGHA2P01877 340 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 SNX17Q15036 470 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 CCDC85BQ15834 202 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-206ENST00000531430 ERC1Q8IUD2 1116 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 SIAH1Q8IUQ4 282 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 ABRAQ8N0Z2 381 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 LCORLQ8N3X6 602 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 VCPKMTQ9H867 229 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 DCP1AQ9NPI6 582 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-206ENST00000531430 SWAP70Q9UH65 585 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-206ENST00000531430 TMX2Q9Y320 296 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
NEDD8-206ENST00000531430 FOCADQ5VW36 1801 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 MAST2Q6P0Q8 1798 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 RLFQ13129 1914 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 KIAA0355O15063 1070 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 WDR46O15213 610 aaKnown RBP11.14□□□□□ -0.63
NEDD8-206ENST00000531430 IFIT2P09913 472 aaKnown RBP11.14□□□□□ -0.63
NEDD8-206ENST00000531430 EEF2P13639 858 aaKnown RBP11.14□□□□□ -0.63
NEDD8-206ENST00000531430 AKR1A1P14550 325 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 COL9A1P20849 921 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 IGFBP4P22692 258 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 DNAJB2P25686 324 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 ACLYP53396 1101 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 FAAP100Q0VG06 881 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 KCNA10Q16322 511 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 SLFNL1Q499Z3 407 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 C1orf53Q5VUE5 145 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 CPXCR1Q8N123 301 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 USP38Q8NB14 1042 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 NUP133Q8WUM0 1156 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 TIFAQ96CG3 184 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 DDRGK1Q96HY6 314 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 GAS2L1Q99501 681 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-206ENST00000531430 ZNF576Q9H609 170 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 FAM184BQ9ULE4 1060 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 EYSQ5T1H1 3165 aa11.14□□□□□ -0.63
NEDD8-206ENST00000531430 ZNFX1Q9P2E3 1918 aaKnown RBP11.13□□□□□ -0.63
NEDD8-206ENST00000531430 MYO9BQ13459 2157 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 USP17L21D6R901 530 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 SMIM22K7EJ46 135 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 MBD4O95243 580 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 TIMP1P01033 207 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 ACRP10323 421 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 CDK8P49336 464 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 ZNF792Q3KQV3 632 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 FAM83BQ5T0W9 1011 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 RIOX2Q8IUF8 465 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 CLASRPQ8N2M8 674 aaKnown RBP11.13□□□□□ -0.63
NEDD8-206ENST00000531430 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.13□□□□□ -0.635e-9■□□□□ 8.6
NEDD8-206ENST00000531430 BOLA2Q9H3K6 86 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 PRDM12Q9H4Q4 367 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 VCANP13611 3396 aa11.13□□□□□ -0.63
NEDD8-206ENST00000531430 VWA5AO00534 786 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 C6orf222P0C671 652 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 PBX2P40425 430 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 IRX5P78411 483 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 CEP85Q6P2H3 762 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 CCDC17Q96LX7 622 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 GLT1D1Q96MS3 346 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 PPP1R12CQ9BZL4 782 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 KANSL2Q9H9L4 492 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 SPC25Q9HBM1 224 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 NRBP1Q9UHY1 535 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 ISY1Q9ULR0 285 aaKnown RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 DIS3Q9Y2L1 958 aaKnown RBP11.12□□□□□ -0.63
NEDD8-206ENST00000531430 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
NEDD8-206ENST00000531430 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 RLBP1P12271 317 aa11.11□□□□□ -0.63
NEDD8-206ENST00000531430 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEDD8-206ENST00000531430 GNASQ5JWF2 1037 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms