RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 CASP8AP2Q9UKL3 1982 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 TLR2O60603 784 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 FLOT1O75955 427 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 BMP3P12645 472 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 CPA1P15085 419 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 SLC1A4P43007 532 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 HERVK_113P62684 666 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 PNMA1Q8ND90 353 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 ANKS1AQ92625 1134 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 GMCL1Q96IK5 515 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
SMPD1-206ENST00000531336 SENP2Q9HC62 589 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 GPHNQ9NQX3 736 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-206ENST00000531336 FBXO28Q9NVF7 368 aa16.22■□□□□ 0.19
SMPD1-206ENST00000531336 FRMPD2Q68DX3 1309 aaPredicted RBP16.21■□□□□ 0.19
SMPD1-206ENST00000531336 MGAMO43451 1857 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 SPDYE16A6NNV3 312 aaPredicted RBP16.21■□□□□ 0.19
SMPD1-206ENST00000531336 GPR25O00155 361 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 SH2B2O14492 632 aaPredicted RBP16.21■□□□□ 0.19
SMPD1-206ENST00000531336 HMGB1P09429 215 aaKnown RBP16.21■□□□□ 0.19
SMPD1-206ENST00000531336 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
SMPD1-206ENST00000531336 LBX1P52954 281 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 KCTD1Q719H9 257 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 IGDCC4Q8TDY8 1250 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 TMEM87BQ96K49 555 aa16.21■□□□□ 0.19
SMPD1-206ENST00000531336 PDHBP11177 359 aa16.2■□□□□ 0.18
SMPD1-206ENST00000531336 PSMA5P28066 241 aa16.2■□□□□ 0.18
SMPD1-206ENST00000531336 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
SMPD1-206ENST00000531336 C17orf99Q6UX52 265 aa16.2■□□□□ 0.18
SMPD1-206ENST00000531336 NFXL1Q6ZNB6 911 aa16.2■□□□□ 0.18
SMPD1-206ENST00000531336 DHX32Q7L7V1 743 aaKnown RBP16.2■□□□□ 0.18
SMPD1-206ENST00000531336 ATG4CQ96DT6 458 aa16.2■□□□□ 0.18
SMPD1-206ENST00000531336 PAGR1Q9BTK6 254 aa16.2■□□□□ 0.18
SMPD1-206ENST00000531336 LY9Q9HBG7 655 aa16.2■□□□□ 0.18
SMPD1-206ENST00000531336 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 PEX10O60683 326 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-206ENST00000531336 BCRP11274 1271 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 GCLCP48506 637 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-206ENST00000531336 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
SMPD1-206ENST00000531336 COG2Q14746 738 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 GTF3C2Q8WUA4 911 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-206ENST00000531336 ZNF296Q8WUU4 475 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-206ENST00000531336 SLF1Q9BQI6 1058 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 PPP1R9AQ9ULJ8 1098 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
SMPD1-206ENST00000531336 CCDC69A6NI79 296 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 FKTNO75072 461 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 DSG3P32926 999 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 FGD1P98174 961 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 SP3Q02447 781 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 UPF3BQ9BZI7 483 aaKnown RBP16.18■□□□□ 0.18
SMPD1-206ENST00000531336 TXNRD2Q9NNW7 524 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
SMPD1-206ENST00000531336 GOLGA8HP0CJ92 632 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 STAT2P52630 851 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 ANAPC15P60006 121 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 FAM110CQ1W6H9 321 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 NOM1Q5C9Z4 860 aaKnown RBP16.17■□□□□ 0.18
SMPD1-206ENST00000531336 TTBK2Q6IQ55 1244 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 POTEEQ6S8J3 1075 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 Q6ZUG5 572 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 RUFY3Q7L099 469 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 CATIPQ7Z7H3 387 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 FAM160B2Q86V87 743 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 MYL10Q9BUA6 226 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 UPF2Q9HAU5 1272 aaKnown RBP16.17■□□□□ 0.18
SMPD1-206ENST00000531336 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
SMPD1-206ENST00000531336 MYH6P13533 1939 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 CNMDO75829 334 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 PARP1P09874 1014 aaKnown RBP16.16■□□□□ 0.18
SMPD1-206ENST00000531336 SLC16A2P36021 539 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 LIFRP42702 1097 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 LBX2Q6XYB7 198 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 RAB11FIP4Q86YS3 637 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 PRPF38AQ8NAV1 312 aaKnown RBP16.16■□□□□ 0.18
SMPD1-206ENST00000531336 CD99L2Q8TCZ2 262 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 CHURC1Q8WUH1 139 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 TM6SF1Q9BZW5 370 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 BTBD7Q9P203 1132 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 RBPJLQ9UBG7 517 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
SMPD1-206ENST00000531336 PLXNB2O15031 1838 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 VWA5AO00534 786 aa16.15■□□□□ 0.18
SMPD1-206ENST00000531336 DDAH1O94760 285 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms