RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 RGS16O15492 202 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-229ENST00000531014 TRPA1O75762 1119 aa7.99□□□□□ -1.13
CTNND1-229ENST00000531014 NPR1P16066 1061 aa7.99□□□□□ -1.13
CTNND1-229ENST00000531014 EEF1B2P24534 225 aaKnown RBP7.99□□□□□ -1.13
CTNND1-229ENST00000531014 PRKAR2BP31323 418 aa7.99□□□□□ -1.13
CTNND1-229ENST00000531014 USP6P35125 1406 aa7.99□□□□□ -1.13
CTNND1-229ENST00000531014 CCT2P78371 535 aaKnown RBP7.99□□□□□ -1.13
CTNND1-229ENST00000531014 VWA3BQ502W6 1294 aa7.99□□□□□ -1.13
CTNND1-229ENST00000531014 MUM1L1Q5H9M0 696 aa7.99□□□□□ -1.13
CTNND1-229ENST00000531014 DENND2CQ68D51 928 aa7.99□□□□□ -1.13
CTNND1-229ENST00000531014 NBPF10Q6P3W6 841 aaKnown RBP7.99□□□□□ -1.13
CTNND1-229ENST00000531014 FRMPD1Q5SYB0 1578 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 LMNB1P20700 586 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 ASIC1P78348 528 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 TAF11Q15544 211 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 SUPT20HL1Q3ZLR7 823 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 EFCAB13Q8IY85 973 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 NBPF15Q8N660 670 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 ANKRD42Q8N9B4 389 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 TRIM6Q9C030 488 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 CDK12Q9NYV4 1490 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 KRT8P05787 483 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 HNRNPCP07910 306 aaKnown RBP eCLIP7.98□□□□□ -1.139e-7■■■■□ 20.8
CTNND1-229ENST00000531014 PHBP35232 272 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 RNASELQ05823 741 aaKnown RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 ELF2Q15723 593 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 ARHGAP44Q17R89 818 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 NXNQ6DKJ4 435 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 REM2Q8IYK8 340 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 PARP2Q9UGN5 583 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 ADAMTS8Q9UP79 889 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 JRKLQ9Y4A0 524 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 PALLDQ8WX93 1383 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 RICTORQ6R327 1708 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 AKR1B15C9JRZ8 316 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 GOLGA8KD6RF30 607 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 KRT75O95678 551 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 CWF19L2Q2TBE0 894 aaKnown RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 DCAF15Q66K64 600 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 HS2ST1Q7LGA3 356 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 HDDC2Q7Z4H3 204 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 TRIML2Q8N7C3 387 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 MYRIPQ8NFW9 859 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 GFM2Q969S9 779 aaKnown RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 MASTLQ96GX5 879 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 SH3GL3Q99963 347 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 CARD6Q9BX69 1037 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 SSH2Q76I76 1423 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 GNGT2O14610 69 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 KDM1AO60341 852 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 ZSCAN22P10073 491 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 DEUP1Q05D60 604 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 TRMT1LQ7Z2T5 733 aaKnown RBP7.98□□□□□ -1.13
CTNND1-229ENST00000531014 UBE3BQ7Z3V4 1068 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 ARHGEF25Q86VW2 580 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 BCAS4Q8TDM0 211 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 TRIM8Q9BZR9 551 aa7.98□□□□□ -1.13
CTNND1-229ENST00000531014 DAB1O75553 588 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 RPS6KA4O75676 772 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 SF3A3Q12874 501 aaKnown RBP eCLIP7.97□□□□□ -1.132e-7■■■□□ 14.9
CTNND1-229ENST00000531014 ANKRD35Q8N283 1001 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 TEKT1Q969V4 418 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 PPWD1Q96BP3 646 aaKnown RBP7.97□□□□□ -1.13
CTNND1-229ENST00000531014 CABP5Q9NP86 173 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 DBNLQ9UJU6 430 aaKnown RBP7.97□□□□□ -1.13
CTNND1-229ENST00000531014 MAP3K7O43318 606 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 CA12O43570 354 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 PYGLP06737 847 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 SREBF2Q12772 1141 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 E2F5Q15329 346 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 MMEL1Q495T6 779 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 DPH6Q7L8W6 267 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 NME8Q8N427 588 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 MGARPQ8TDB4 240 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 FHDC1Q9C0D6 1143 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-229ENST00000531014 PACSIN2Q9UNF0 486 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-229ENST00000531014 ESYT2A0FGR8 921 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 APOA1P02647 267 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 SERPINB2P05120 415 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 KRT4P19013 534 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 MAP3K12Q12852 859 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 TRIM14Q14142 442 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 APLFQ8IW19 511 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-229ENST00000531014 KIFAP3Q92845 792 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 CAPS2Q9BXY5 557 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 TRIM31Q9BZY9 425 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 PICK1Q9NRD5 415 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 ZNF711Q9Y462 761 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 HLA-DOAP06340 250 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 TYRO3Q06418 890 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 SPZ1Q9BXG8 430 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 IFNKQ9P0W0 207 aa7.97□□□□□ -1.13
CTNND1-229ENST00000531014 PHLPP1O60346 1717 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 MST1RQ04912 1400 aa7.96□□□□□ -1.13
CTNND1-229ENST00000531014 KIF1CO43896 1103 aaKnown RBP7.96□□□□□ -1.13
CTNND1-229ENST00000531014 CARSP49589 748 aaKnown RBP7.96□□□□□ -1.13
CTNND1-229ENST00000531014 BRD3Q15059 726 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms