RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 USP17L15C9J2P7 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L13C9JLJ4 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L11C9JVI0 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L18D6R9N7 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L22D6RA61 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L17D6RBQ6 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L19D6RCP7 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L20D6RJB6 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 GPR25O00155 361 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 IGF2BP3O00425 579 aaKnown RBP eCLIP17.35■□□□□ 0.37
SRPRA-204ENST00000530680 NDUFB10O96000 172 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 ANTXR2P58335 489 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 USP17L24Q0WX57 530 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 NOM1Q5C9Z4 860 aaKnown RBP17.35■□□□□ 0.37
SRPRA-204ENST00000530680 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 TMTC2Q8N394 836 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 TCEANC2Q96MN5 208 aa17.35■□□□□ 0.37
SRPRA-204ENST00000530680 CTDP1Q9Y5B0 961 aaPredicted RBP17.35■□□□□ 0.37
SRPRA-204ENST00000530680 SH2B2O14492 632 aaPredicted RBP17.34■□□□□ 0.37
SRPRA-204ENST00000530680 FLOT1O75955 427 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 BMP3P12645 472 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 CPA1P15085 419 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 FBXO46Q6PJ61 603 aaPredicted RBP17.34■□□□□ 0.37
SRPRA-204ENST00000530680 RUFY3Q7L099 469 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 SIAH1Q8IUQ4 282 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 NKX2-3Q8TAU0 364 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 UPF3BQ9BZI7 483 aaKnown RBP17.34■□□□□ 0.37
SRPRA-204ENST00000530680 TM6SF1Q9BZW5 370 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 ZFYVE28Q9HCC9 887 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 SLC45A1Q9Y2W3 748 aa17.34■□□□□ 0.37
SRPRA-204ENST00000530680 PARP14Q460N5 1801 aa17.33■□□□□ 0.37
SRPRA-204ENST00000530680 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.36
SRPRA-204ENST00000530680 Q6ZUG5 572 aa17.33■□□□□ 0.36
SRPRA-204ENST00000530680 NUP133Q8WUM0 1156 aa17.33■□□□□ 0.36
SRPRA-204ENST00000530680 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.36
SRPRA-204ENST00000530680 LY9Q9HBG7 655 aa17.33■□□□□ 0.36
SRPRA-204ENST00000530680 SLC12A7Q9Y666 1083 aa17.33■□□□□ 0.36
SRPRA-204ENST00000530680 MOGSQ13724 837 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 SEC23AQ15436 765 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 GPAT2Q6NUI2 795 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
SRPRA-204ENST00000530680 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 GMCL1Q96IK5 515 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 PTPN18Q99952 460 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 CFHR5Q9BXR6 569 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 ZSWIM6Q9HCJ5 1215 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 PDRG1Q9NUG6 133 aa17.32■□□□□ 0.36
SRPRA-204ENST00000530680 FRMPD2Q68DX3 1309 aaPredicted RBP17.31■□□□□ 0.36
SRPRA-204ENST00000530680 DHX16O60231 1041 aaKnown RBP17.31■□□□□ 0.36
SRPRA-204ENST00000530680 FKTNO75072 461 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 DDAH1O94760 285 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 PARP1P09874 1014 aaKnown RBP17.31■□□□□ 0.36
SRPRA-204ENST00000530680 CALM1P0DP23 149 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 CALM2P0DP24 149 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 CALM3P0DP25 149 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 CYP2C8P10632 490 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 LIFRP42702 1097 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 NOVP48745 357 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 STAT2P52630 851 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 GPATCH4Q5T3I0 446 aaKnown RBP17.31■□□□□ 0.36
SRPRA-204ENST00000530680 KCTD1Q719H9 257 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 IGDCC4Q8TDY8 1250 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
SRPRA-204ENST00000530680 ASCC2Q9H1I8 757 aaPredicted RBP17.31■□□□□ 0.36
SRPRA-204ENST00000530680 GPCPD1Q9NPB8 672 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 MYH6P13533 1939 aa17.31■□□□□ 0.36
SRPRA-204ENST00000530680 COL11A1P12107 1806 aaPredicted RBP17.31■□□□□ 0.36
SRPRA-204ENST00000530680 KLF18A0A0U1RQI7 1052 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 TMEM232C9JQI7 657 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 PDHBP11177 359 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 HOXA7P31268 230 aaPredicted RBP17.3■□□□□ 0.36
SRPRA-204ENST00000530680 KIF5BP33176 963 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 RBM25P49756 843 aaKnown RBP17.3■□□□□ 0.36
SRPRA-204ENST00000530680 EXOSC10Q01780 885 aaKnown RBP17.3■□□□□ 0.36
SRPRA-204ENST00000530680 CRHR2Q13324 411 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 KIAA1755Q5JYT7 1200 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 FAM160B2Q86V87 743 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 MICU3Q86XE3 530 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 CHURC1Q8WUH1 139 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 BRF1Q92994 677 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 KIFC2Q96AC6 838 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 CWC22Q9HCG8 908 aaKnown RBP17.3■□□□□ 0.36
SRPRA-204ENST00000530680 FEM1BQ9UK73 627 aa17.3■□□□□ 0.36
SRPRA-204ENST00000530680 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 NEK4P51957 841 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 HERVK_113P62684 666 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 COG2Q14746 738 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 PAGR1Q9BTK6 254 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 GPHNQ9NQX3 736 aaPredicted RBP17.29■□□□□ 0.36
SRPRA-204ENST00000530680 HOXC10Q9NYD6 342 aa17.29■□□□□ 0.36
SRPRA-204ENST00000530680 A0A0G2JMZ2 1700 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms