RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 UBE3BQ7Z3V4 1068 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 VPS37DQ86XT2 251 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 DRAXINQ8NBI3 349 aaPredicted RBP15.78■□□□□ 0.12
PCF11-204ENST00000530660 ACSBG1Q96GR2 724 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 EHD2Q9NZN4 543 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 GGA2Q9UJY4 613 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 CLTAP09496 248 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 FAM153BP0C7A2 387 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 IDEP14735 1019 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 CASP1P29466 404 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 HERVK_113P62684 666 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 IFFO1Q0D2I5 559 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 FAM153CQ494X1 144 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 MCMDC2Q4G0Z9 681 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 DDX46Q7L014 1031 aaKnown RBP15.78■□□□□ 0.12
PCF11-204ENST00000530660 PNMA8AQ86V59 439 aaPredicted RBP15.78■□□□□ 0.12
PCF11-204ENST00000530660 RPUSD2Q8IZ73 545 aaKnown RBP15.78■□□□□ 0.12
PCF11-204ENST00000530660 EHBP1Q8NDI1 1231 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 VPS16Q9H269 839 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 FAM153AQ9UHL3 310 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 DACH1Q9UI36 760 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 PPP6R2O75170 966 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 PRPHP41219 470 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 TTC39AQ5SRH9 613 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 CFAP58Q5T655 872 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 CCDC51Q96ER9 411 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 FAM167BQ9BTA0 163 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 LACRTQ9GZZ8 138 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 RCCD1A6NED2 376 aa15.77■□□□□ 0.12
PCF11-204ENST00000530660 HOXC9P31274 260 aa15.77■□□□□ 0.12
PCF11-204ENST00000530660 USP4Q13107 963 aa15.77■□□□□ 0.12
PCF11-204ENST00000530660 FILIP1LQ4L180 1135 aa15.77■□□□□ 0.12
PCF11-204ENST00000530660 NFXL1Q6ZNB6 911 aa15.77■□□□□ 0.12
PCF11-204ENST00000530660 CCDC47Q96A33 483 aaKnown RBP15.77■□□□□ 0.12
PCF11-204ENST00000530660 HVCN1Q96D96 273 aa15.77■□□□□ 0.12
PCF11-204ENST00000530660 HAUS4Q9H6D7 363 aa15.77■□□□□ 0.12
PCF11-204ENST00000530660 GRM8O00222 908 aa15.77■□□□□ 0.11
PCF11-204ENST00000530660 CPLX1O14810 134 aa15.77■□□□□ 0.11
PCF11-204ENST00000530660 LINGO3P0C6S8 592 aa15.77■□□□□ 0.11
PCF11-204ENST00000530660 SARSP49591 514 aaKnown RBP15.77■□□□□ 0.11
PCF11-204ENST00000530660 SLC30A9Q6PML9 568 aa15.77■□□□□ 0.11
PCF11-204ENST00000530660 SEC16BQ96JE7 1060 aa15.77■□□□□ 0.11
PCF11-204ENST00000530660 MAP3K14Q99558 947 aa15.77■□□□□ 0.11
PCF11-204ENST00000530660 PCDHGC5Q9Y5F6 944 aa15.77■□□□□ 0.11
PCF11-204ENST00000530660 FAM237AA0A1B0GTK4 181 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 MACROD2A1Z1Q3 448 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 PRAMEF22A3QJZ6 481 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 RTN3O95197 1032 aaPredicted RBP15.76■□□□□ 0.11
PCF11-204ENST00000530660 PDCD2Q16342 344 aaPredicted RBP15.76■□□□□ 0.11
PCF11-204ENST00000530660 HOMEZQ8IX15 550 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 IQCKQ8N0W5 287 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 DBNLQ9UJU6 430 aaKnown RBP15.76■□□□□ 0.11
PCF11-204ENST00000530660 ESYT3A0FGR9 886 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 N4BP3O15049 544 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 DIAPH2O60879 1101 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 AIMP1Q12904 312 aaKnown RBP15.76■□□□□ 0.11
PCF11-204ENST00000530660 BYSLQ13895 437 aaKnown RBP15.76■□□□□ 0.11
PCF11-204ENST00000530660 SPATA1Q5VX52 437 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 EMBQ6PCB8 327 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 KSR2Q6VAB6 950 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 KLHL23Q8NBE8 558 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 LMCD1Q9NZU5 365 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 ZSCAN5CA6NGD5 496 aaPredicted RBP15.76■□□□□ 0.11
PCF11-204ENST00000530660 GOLGA8BA8MQT2 603 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 TMOD1P28289 359 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 CXCR5P32302 372 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 GUCY2FP51841 1108 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 TRIM58Q8NG06 486 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
PCF11-204ENST00000530660 SYNRGQ9UMZ2 1314 aa15.76■□□□□ 0.11
PCF11-204ENST00000530660 GMNCA6NCL1 334 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 NLRP6P59044 892 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 ITGB3BPQ13352 177 aaPredicted RBP15.75■□□□□ 0.11
PCF11-204ENST00000530660 CREG2Q8IUH2 290 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 CORO1CQ9ULV4 474 aaPredicted RBP15.75■□□□□ 0.11
PCF11-204ENST00000530660 NEO1Q92859 1461 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 KLF18A0A0U1RQI7 1052 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 LAMB3Q13751 1172 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 SPATA4Q8NEY3 305 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 NFU1Q9UMS0 254 aa15.75■□□□□ 0.11
PCF11-204ENST00000530660 ERICH2A1L162 156 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 BTBD11A6QL63 1104 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 NGDNQ8NEJ9 315 aaKnown RBP15.74■□□□□ 0.11
PCF11-204ENST00000530660 SMCR8Q8TEV9 937 aaPredicted RBP15.74■□□□□ 0.11
PCF11-204ENST00000530660 AGAP11Q8TF27 550 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 PIK3R5Q8WYR1 880 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 ATP6V1G3Q96LB4 118 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 STIM2Q9P246 746 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 HPS5Q9UPZ3 1129 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 MYH10P35580 1976 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 TECPR2O15040 1411 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 A0A1B0GVG6 124 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 CARSP49589 748 aaKnown RBP15.74■□□□□ 0.11
PCF11-204ENST00000530660 NT5DC1Q5TFE4 455 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 CDKAL1Q5VV42 579 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 MAEAQ7L5Y9 396 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 MMGT1Q8N4V1 131 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 IFT81Q8WYA0 676 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 EZH1Q92800 747 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms