RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 WTAPQ15007 396 aa25.02■■□□□ 1.6
CAPN1-220ENST00000530567 BLOC1S2Q6QNY1 142 aa25.02■■□□□ 1.6
CAPN1-220ENST00000530567 POTEEQ6S8J3 1075 aa25.02■■□□□ 1.6
CAPN1-220ENST00000530567 BEGAINQ9BUH8 593 aa25.02■■□□□ 1.6
CAPN1-220ENST00000530567 TANGO6Q9C0B7 1094 aa25.02■■□□□ 1.6
CAPN1-220ENST00000530567 ZSWIM6Q9HCJ5 1215 aa25.02■■□□□ 1.6
CAPN1-220ENST00000530567 ERICH2A1L162 156 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 PDHBP11177 359 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 OSBPP22059 807 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 PSMA5P28066 241 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 IRX3P78415 501 aaPredicted RBP25.01■■□□□ 1.59
CAPN1-220ENST00000530567 CHMP4CQ96CF2 233 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 P2RX7Q99572 595 aaKnown RBP25.01■■□□□ 1.59
CAPN1-220ENST00000530567 ZFYVE28Q9HCC9 887 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 FBXO28Q9NVF7 368 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 TSKSQ9UJT2 592 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 MTMR7Q9Y216 660 aa25.01■■□□□ 1.59
CAPN1-220ENST00000530567 FOXN1O15353 648 aa25■■□□□ 1.59
CAPN1-220ENST00000530567 TLR2O60603 784 aa25■■□□□ 1.59
CAPN1-220ENST00000530567 BMP3P12645 472 aa25■■□□□ 1.59
CAPN1-220ENST00000530567 SLC1A4P43007 532 aa25■■□□□ 1.59
CAPN1-220ENST00000530567 DCAF4Q8WV16 495 aa25■■□□□ 1.59
CAPN1-220ENST00000530567 A0A0G2JMZ2 1700 aa25■■□□□ 1.59
CAPN1-220ENST00000530567 SPDYE16A6NNV3 312 aaPredicted RBP24.99■■□□□ 1.59
CAPN1-220ENST00000530567 LIFRP42702 1097 aa24.99■■□□□ 1.59
CAPN1-220ENST00000530567 HERVK_113P62684 666 aa24.99■■□□□ 1.59
CAPN1-220ENST00000530567 FLOT1O75955 427 aa24.98■■□□□ 1.59
CAPN1-220ENST00000530567 RUFY3Q7L099 469 aa24.98■■□□□ 1.59
CAPN1-220ENST00000530567 C22orf23Q9BZE7 217 aa24.98■■□□□ 1.59
CAPN1-220ENST00000530567 UPF3BQ9BZI7 483 aaKnown RBP24.98■■□□□ 1.59
CAPN1-220ENST00000530567 RBM25P49756 843 aaKnown RBP24.97■■□□□ 1.59
CAPN1-220ENST00000530567 COG2Q14746 738 aa24.97■■□□□ 1.59
CAPN1-220ENST00000530567 C17orf99Q6UX52 265 aa24.97■■□□□ 1.59
CAPN1-220ENST00000530567 LBX2Q6XYB7 198 aa24.97■■□□□ 1.59
CAPN1-220ENST00000530567 KCTD1Q719H9 257 aa24.97■■□□□ 1.59
CAPN1-220ENST00000530567 SGMS1Q86VZ5 419 aa24.97■■□□□ 1.59
CAPN1-220ENST00000530567 SMCR8Q8TEV9 937 aaPredicted RBP24.97■■□□□ 1.59
CAPN1-220ENST00000530567 MYPNQ86TC9 1320 aa24.97■■□□□ 1.59
CAPN1-220ENST00000530567 BCRP11274 1271 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 DSG3P32926 999 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 ZNF543Q08ER8 600 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 TROAPQ12815 778 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 CCDC96Q2M329 555 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 FBXL16Q8N461 479 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 KIF2CQ99661 725 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 AGXT2Q9BYV1 514 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 CPA4Q9UI42 421 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 PPP1R9AQ9ULJ8 1098 aa24.96■■□□□ 1.59
CAPN1-220ENST00000530567 FRMPD2Q68DX3 1309 aaPredicted RBP24.96■■□□□ 1.59
CAPN1-220ENST00000530567 HSPA8P11142 646 aaKnown RBP24.95■■□□□ 1.59
CAPN1-220ENST00000530567 NOM1Q5C9Z4 860 aaKnown RBP24.95■■□□□ 1.59
CAPN1-220ENST00000530567 TTBK2Q6IQ55 1244 aa24.95■■□□□ 1.59
CAPN1-220ENST00000530567 ZNF654Q8IZM8 581 aa24.95■■□□□ 1.59
CAPN1-220ENST00000530567 TMTC2Q8N394 836 aa24.95■■□□□ 1.59
CAPN1-220ENST00000530567 ATG4CQ96DT6 458 aa24.95■■□□□ 1.59
CAPN1-220ENST00000530567 TXNRD2Q9NNW7 524 aa24.95■■□□□ 1.59
CAPN1-220ENST00000530567 CYP46A1Q9Y6A2 500 aa24.95■■□□□ 1.59
CAPN1-220ENST00000530567 TMEM232C9JQI7 657 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 PEX10O60683 326 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 GCLCP48506 637 aaPredicted RBP24.95■■□□□ 1.58
CAPN1-220ENST00000530567 Q6ZUG5 572 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 SLF1Q9BQI6 1058 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 RBPJLQ9UBG7 517 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 FEM1BQ9UK73 627 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 BRPF3Q9ULD4 1205 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 ADAMTS5Q9UNA0 930 aa24.95■■□□□ 1.58
CAPN1-220ENST00000530567 GPR25O00155 361 aa24.94■■□□□ 1.58
CAPN1-220ENST00000530567 PLA2G6O60733 806 aa24.94■■□□□ 1.58
CAPN1-220ENST00000530567 CNMDO75829 334 aa24.94■■□□□ 1.58
CAPN1-220ENST00000530567 CATIPQ7Z7H3 387 aa24.94■■□□□ 1.58
CAPN1-220ENST00000530567 MYL10Q9BUA6 226 aa24.94■■□□□ 1.58
CAPN1-220ENST00000530567 GPCPD1Q9NPB8 672 aa24.94■■□□□ 1.58
CAPN1-220ENST00000530567 HOXC10Q9NYD6 342 aa24.94■■□□□ 1.58
CAPN1-220ENST00000530567 COL11A1P12107 1806 aaPredicted RBP24.93■■□□□ 1.58
CAPN1-220ENST00000530567 DDAH1O94760 285 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 GOLGA8HP0CJ92 632 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 STAT2P52630 851 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 GRM4Q14833 912 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 BTNL9Q6UXG8 535 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 NFXL1Q6ZNB6 911 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 ANKRD13CQ8N6S4 541 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 GTF3C2Q8WUA4 911 aaPredicted RBP24.93■■□□□ 1.58
CAPN1-220ENST00000530567 TBC1D32Q96NH3 1257 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 UPF2Q9HAU5 1272 aaKnown RBP24.93■■□□□ 1.58
CAPN1-220ENST00000530567 MORF4L1Q9UBU8 362 aa24.93■■□□□ 1.58
CAPN1-220ENST00000530567 ISY1Q9ULR0 285 aaKnown RBP24.93■■□□□ 1.58
CAPN1-220ENST00000530567 CCDC69A6NI79 296 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 TOB2Q14106 344 aaPredicted RBP24.92■■□□□ 1.58
CAPN1-220ENST00000530567 FAM110CQ1W6H9 321 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 ASPRV1Q53RT3 343 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 GPATCH4Q5T3I0 446 aaKnown RBP24.92■■□□□ 1.58
CAPN1-220ENST00000530567 APOA5Q6Q788 366 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 FAM160B2Q86V87 743 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 STAG2Q8N3U4 1231 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 REPS2Q8NFH8 660 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 BRF1Q92994 677 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 BTBD7Q9P203 1132 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 MAD2L2Q9UI95 211 aa24.92■■□□□ 1.58
CAPN1-220ENST00000530567 PALM3A6NDB9 673 aaPredicted RBP24.91■■□□□ 1.58
CAPN1-220ENST00000530567 VWA5AO00534 786 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms