RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 THRAP3Q9Y2W1 955 aaKnown RBP8.75□□□□□ -1.01
CAPRIN1-208ENST00000530008 EMC9Q9Y3B6 208 aa8.75□□□□□ -1.01
CAPRIN1-208ENST00000530008 ACTL7BQ9Y614 415 aa8.75□□□□□ -1.01
CAPRIN1-208ENST00000530008 C6orf222P0C671 652 aaPredicted RBP8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 ITGA4P13612 1032 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 HOXB4P17483 251 aaPredicted RBP8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 FAM50AQ14320 339 aaKnown RBP8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 C2CD4AQ8NCU7 369 aaPredicted RBP8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 ADCY4Q8NFM4 1077 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 SLC16A10Q8TF71 515 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 DDX1Q92499 740 aaKnown RBP8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 VWCEQ96DN2 955 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 KREMEN1Q96MU8 473 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 TRIM39Q9HCM9 518 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 NDOR1Q9UHB4 597 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 PCOLCE2Q9UKZ9 415 aa8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 COL17A1Q9UMD9 1497 aaPredicted RBP8.74□□□□□ -1.01
CAPRIN1-208ENST00000530008 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 CELA2BP08218 269 aaPredicted RBP8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 WWC2Q6AWC2 1192 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 FDX2Q6P4F2 183 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 POMZP3Q6PJE2 187 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 LYPD4Q6UWN0 246 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 DDX46Q7L014 1031 aaKnown RBP8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 PPM1KQ8N3J5 372 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 ARHGEF39Q8N4T4 335 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 CRACR2BQ8N4Y2 399 aaPredicted RBP8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 SLC7A14Q8TBB6 771 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 BTN2A2Q8WVV5 523 aa8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
CAPRIN1-208ENST00000530008 A0A087WZG4 1122 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 KRBA1A5PL33 1030 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 FAM83GA6ND36 823 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 DLX3O60479 287 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 BRAPQ7Z569 592 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 STRA8Q7Z7C7 330 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 AHI1Q8N157 1196 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 RIN3Q8TB24 985 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 IRF7Q92985 503 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 SLC52A2Q9HAB3 445 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 SLC52A1Q9NWF4 448 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 CGGBP1Q9UFW8 167 aaPredicted RBP8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 EID1Q9Y6B2 187 aa8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 ARID4BQ4LE39 1312 aaPredicted RBP8.72□□□□□ -1.01
CAPRIN1-208ENST00000530008 CPEP16870 476 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 ZNF445P59923 1031 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 GABREP78334 506 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 ANKRD34AQ69YU3 496 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 IGF2-ASQ6U949 168 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 GSTCDQ8NEC7 633 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 LEO1Q8WVC0 666 aaPredicted RBP8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 PCDHB12Q9Y5F1 795 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 WASHC2CQ9Y4E1 1318 aa8.71□□□□□ -1.02
CAPRIN1-208ENST00000530008 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 EFCAB14O75071 495 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 KCNH1O95259 989 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 EYA4O95677 639 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 POU3F2P20265 443 aaPredicted RBP8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 GTF2IRD2BQ6EKJ0 949 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 LETMD1Q6P1Q0 360 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 FGD2Q7Z6J4 655 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 GTF2IRD2Q86UP8 949 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 RAVER1Q8IY67 606 aaKnown RBP8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 BRF1Q92994 677 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 TRIM11Q96F44 468 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 MIPEPQ99797 713 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 ASPNQ9BXN1 380 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 RRAGCQ9HB90 399 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 TCEAL9Q9UHQ7 104 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 FBXL21Q9UKT6 434 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 TNPO3Q9Y5L0 923 aaKnown RBP8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 FHOD1Q9Y613 1164 aa8.7□□□□□ -1.02
CAPRIN1-208ENST00000530008 BLACEA4D250 179 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 ALDH1L1O75891 902 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 ASLP04424 464 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 GUCY2FP51841 1108 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 GFRA1P56159 465 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 SF1Q15637 639 aaKnown RBP8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 NBPF9Q3BBW0 867 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 NOL9Q5SY16 702 aaKnown RBP8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 CDH24Q86UP0 819 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 SYTL5Q8TDW5 730 aaPredicted RBP8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 RNF141Q8WVD5 230 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 KCTD13Q8WZ19 329 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 FBXL18Q96ME1 805 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 ACSS3Q9H6R3 686 aa8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 DIS3Q9Y2L1 958 aaKnown RBP8.69□□□□□ -1.02
CAPRIN1-208ENST00000530008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 SLITRK5O94991 958 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 NPTXRO95502 500 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 ETV3P41162 512 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 NEK4P51957 841 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 MAP4K2Q12851 820 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 STRN3Q13033 797 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 PPP2R5DQ14738 602 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 PCBP1Q15365 356 aaKnown RBP eCLIP8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 NTRK3Q16288 839 aa8.68□□□□□ -1.02
CAPRIN1-208ENST00000530008 AGGF1Q8N302 714 aaeCLIP8.68□□□□□ -1.025e-6■□□□□ 10.5
CAPRIN1-208ENST00000530008 PTPRN2Q92932 1015 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms