RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 INHBEP58166 350 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 NOGQ13253 232 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 MOGSQ13724 837 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 SPICE1Q8N0Z3 855 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 FANCBQ8NB91 859 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 NUP133Q8WUM0 1156 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 CHMP4CQ96CF2 233 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
SMCO4-205ENST00000529714 RBM28Q9NW13 759 aaKnown RBP15.91■□□□□ 0.14
SMCO4-205ENST00000529714 CCL15-CCL14A0A0B4J2E2 113 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 RAD21O60216 631 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 HSPA6P17066 643 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 SMARCA1P28370 1054 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 HOXA7P31268 230 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-205ENST00000529714 PABPC4Q13310 644 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMCO4-205ENST00000529714 CCL15Q16663 113 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 ME3Q16798 604 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 RTN1Q16799 776 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 CCDC96Q2M329 555 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 GADL1Q6ZQY3 521 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-205ENST00000529714 CAPNS2Q96L46 248 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 LARP6Q9BRS8 491 aaKnown RBP15.9■□□□□ 0.14
SMCO4-205ENST00000529714 SLKQ9H2G2 1235 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-205ENST00000529714 MAD2L2Q9UI95 211 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 NAP1L2Q9ULW6 460 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-205ENST00000529714 AGTPBP1Q9UPW5 1226 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 SLC45A1Q9Y2W3 748 aa15.9■□□□□ 0.14
SMCO4-205ENST00000529714 PARP14Q460N5 1801 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L15C9J2P7 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L13C9JLJ4 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L11C9JVI0 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L18D6R9N7 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L22D6RA61 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L17D6RBQ6 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L19D6RCP7 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L20D6RJB6 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 DHX16O60231 1041 aaKnown RBP15.89■□□□□ 0.13
SMCO4-205ENST00000529714 RXRAP19793 462 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 USP17L24Q0WX57 530 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 SREBF2Q12772 1141 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 MKRN3Q13064 507 aaKnown RBP15.89■□□□□ 0.13
SMCO4-205ENST00000529714 DGKZQ13574 1117 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 FAM83BQ5T0W9 1011 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 CYP4F22Q6NT55 531 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 BTNL9Q6UXG8 535 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 PAXIP1Q6ZW49 1069 aaPredicted RBP15.89■□□□□ 0.13
SMCO4-205ENST00000529714 NOL8Q76FK4 1167 aaKnown RBP15.89■□□□□ 0.13
SMCO4-205ENST00000529714 ANKRD23Q86SG2 305 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 FAM160B2Q86V87 743 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 BRI3BPQ8WY22 251 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 RPAP3Q9H6T3 665 aaPredicted RBP15.89■□□□□ 0.13
SMCO4-205ENST00000529714 ZCCHC17Q9NP64 241 aaKnown RBP15.89■□□□□ 0.13
SMCO4-205ENST00000529714 FEM1BQ9UK73 627 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 MTMR7Q9Y216 660 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 THSD7BQ9C0I4 1608 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 MYPNQ86TC9 1320 aa15.89■□□□□ 0.13
SMCO4-205ENST00000529714 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 STAT2P52630 851 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 GPAT2Q6NUI2 795 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 KCTD1Q719H9 257 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 RASGRP2Q7LDG7 609 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 HSCBQ8IWL3 235 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 CHURC1Q8WUH1 139 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 TMX3Q96JJ7 454 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 NUP88Q99567 741 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-205ENST00000529714 TSHZ2Q9NRE2 1034 aa15.88■□□□□ 0.13
SMCO4-205ENST00000529714 FAM217BQ9NTX9 383 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-205ENST00000529714 TMEM232C9JQI7 657 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 K7ELQ4 463 aaPredicted RBP15.87■□□□□ 0.13
SMCO4-205ENST00000529714 LARGE1O95461 756 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 CDC27P30260 824 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 SCRN1Q12765 414 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 TREML2Q5T2D2 321 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 CPLX2Q6PUV4 134 aaKnown RBP15.87■□□□□ 0.13
SMCO4-205ENST00000529714 CATSPERGQ6ZRH7 1159 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 TMTC3Q6ZXV5 915 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 RAB11FIP4Q86YS3 637 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 CCDC144CPQ8IYA2 1237 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 STAG2Q8N3U4 1231 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 SPZ1Q9BXG8 430 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 GPCPD1Q9NPB8 672 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 PNMA3Q9UL41 463 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 RLFQ13129 1914 aa15.87■□□□□ 0.13
SMCO4-205ENST00000529714 FRMPD2Q68DX3 1309 aaPredicted RBP15.87■□□□□ 0.13
SMCO4-205ENST00000529714 BTBD19C9JJ37 291 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 CDKL5O76039 1030 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 GOLGA8HP0CJ92 632 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 FDX1P10109 184 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 ADD1P35611 737 aaKnown RBP15.86■□□□□ 0.13
SMCO4-205ENST00000529714 MAP2K2P36507 400 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 TM4SF4P48230 202 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 CCT2P78371 535 aaKnown RBP15.86■□□□□ 0.13
SMCO4-205ENST00000529714 STK3Q13188 491 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 PRPF38AQ8NAV1 312 aaKnown RBP15.86■□□□□ 0.13
SMCO4-205ENST00000529714 SLF1Q9BQI6 1058 aa15.86■□□□□ 0.13
SMCO4-205ENST00000529714 NCOA5Q9HCD5 579 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms