RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 C16orf86Q6ZW13 317 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 STK11IPQ8N1F8 1099 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 TRPV1Q8NER1 839 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 MKNK2Q9HBH9 465 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 ARPP21Q9UBL0 812 aaPredicted RBP14.56□□□□□ -0.08
USH1C-208ENST00000529563 DLL1O00548 723 aa14.55□□□□□ -0.08
USH1C-208ENST00000529563 SMARCA5O60264 1052 aaPredicted RBP14.55□□□□□ -0.08
USH1C-208ENST00000529563 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
USH1C-208ENST00000529563 PRAMEF19Q5SWL8 479 aa14.55□□□□□ -0.08
USH1C-208ENST00000529563 ABRAQ8N0Z2 381 aa14.55□□□□□ -0.08
USH1C-208ENST00000529563 FRMPD3Q5JV73 1810 aa14.55□□□□□ -0.08
USH1C-208ENST00000529563 MINDY4BA8MYZ0 360 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 APPP05067 770 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 RARBP10826 455 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 COPB2P35606 906 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 STAT3P40763 770 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 TMEM132BQ14DG7 1078 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 FAM83BQ5T0W9 1011 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 CTR9Q6PD62 1173 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 FERMT2Q96AC1 680 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 MAML3Q96JK9 1138 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 PUS7LQ9H0K6 701 aaKnown RBP14.54□□□□□ -0.08
USH1C-208ENST00000529563 ECHDC1Q9NTX5 307 aa14.54□□□□□ -0.08
USH1C-208ENST00000529563 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
USH1C-208ENST00000529563 BAZ2AQ9UIF9 1905 aaKnown RBP14.54□□□□□ -0.08
USH1C-208ENST00000529563 CHGBP05060 677 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 PGK2P07205 417 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 ADCYAP1R1P41586 468 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 TDO2P48775 406 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 SLC39A5Q6ZMH5 540 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 SIAH1Q8IUQ4 282 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 ZNF287Q9HBT7 754 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 XPNPEP3Q9NQH7 507 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 PPP1R9AQ9ULJ8 1098 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 CNPY2Q9Y2B0 182 aa14.53□□□□□ -0.08
USH1C-208ENST00000529563 ZNF236Q9UL36 1845 aa14.52□□□□□ -0.08
USH1C-208ENST00000529563 SMIM22K7EJ46 135 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 VWA5AO00534 786 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 LRRC41Q15345 812 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 LRRFIP1Q32MZ4 808 aaKnown RBP14.52□□□□□ -0.09
USH1C-208ENST00000529563 TRIM60Q495X7 471 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 FAM47AQ5JRC9 791 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 RNF180Q86T96 592 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 RIOX2Q8IUF8 465 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 DDX11Q96FC9 970 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
USH1C-208ENST00000529563 STXBP5LQ9Y2K9 1186 aa14.52□□□□□ -0.09
USH1C-208ENST00000529563 ZNF697Q5TEC3 545 aa14.51□□□□□ -0.09
USH1C-208ENST00000529563 SNRNP48Q6IEG0 339 aaKnown RBP14.51□□□□□ -0.09
USH1C-208ENST00000529563 ZNF444Q8N0Y2 327 aaPredicted RBP14.51□□□□□ -0.09
USH1C-208ENST00000529563 FAM161BQ96MY7 647 aa14.51□□□□□ -0.09
USH1C-208ENST00000529563 CRBNQ96SW2 442 aa14.51□□□□□ -0.09
USH1C-208ENST00000529563 SLF1Q9BQI6 1058 aa14.51□□□□□ -0.09
USH1C-208ENST00000529563 TINF2Q9BSI4 451 aa14.51□□□□□ -0.09
USH1C-208ENST00000529563 MTMR10Q9NXD2 777 aa14.51□□□□□ -0.09
USH1C-208ENST00000529563 A0A0G2JMZ2 1700 aa14.51□□□□□ -0.09
USH1C-208ENST00000529563 ZBED4O75132 1171 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 NEFLP07196 543 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 CPXCR1Q8N123 301 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 KBTBD3Q8NAB2 608 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 STRBPQ96SI9 672 aaKnown RBP14.5□□□□□ -0.09
USH1C-208ENST00000529563 NUP88Q99567 741 aaPredicted RBP14.5□□□□□ -0.09
USH1C-208ENST00000529563 TEX13BQ9BXU2 312 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 CLIP2Q9UDT6 1046 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 NRBP1Q9UHY1 535 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 MYH7P12883 1935 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 LAMA3Q16787 3333 aa14.5□□□□□ -0.09
USH1C-208ENST00000529563 RNF113AO15541 343 aaKnown RBP14.49□□□□□ -0.09
USH1C-208ENST00000529563 PGK1P00558 417 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 ZFYP08048 801 aaPredicted RBP14.49□□□□□ -0.09
USH1C-208ENST00000529563 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
USH1C-208ENST00000529563 AKR1A1P14550 325 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 GNAT2P19087 354 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 AAMPQ13685 434 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 TSHZ3Q63HK5 1081 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 APPBP2Q92624 585 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 BADQ92934 168 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 KIFC2Q96AC6 838 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 NACAP1Q9BZK3 213 aa14.49□□□□□ -0.09
USH1C-208ENST00000529563 DIS3Q9Y2L1 958 aaKnown RBP14.49□□□□□ -0.09
USH1C-208ENST00000529563 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 F5H6K3 240 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 GPAA1O43292 621 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 PQBP1O60828 265 aaKnown RBP14.48□□□□□ -0.09
USH1C-208ENST00000529563 IGHA2P01877 340 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 RASA1P20936 1047 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 KLRC3Q07444 240 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 IKQ13123 557 aaPredicted RBP14.48□□□□□ -0.09
USH1C-208ENST00000529563 ZNF792Q3KQV3 632 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 SBK1Q52WX2 424 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 PRPF38AQ8NAV1 312 aaKnown RBP14.48□□□□□ -0.09
USH1C-208ENST00000529563 NYAP2Q9P242 653 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 ZHX1Q9UKY1 873 aaPredicted RBP14.48□□□□□ -0.09
USH1C-208ENST00000529563 ADAMTS5Q9UNA0 930 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 TACC3Q9Y6A5 838 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 RLFQ13129 1914 aa14.48□□□□□ -0.09
USH1C-208ENST00000529563 ERC2O15083 957 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 PRDM1O75626 825 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms