RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 LARGE1O95461 756 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 CALM1P0DP23 149 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 CALM2P0DP24 149 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 CALM3P0DP25 149 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 BMP3P12645 472 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 PDIA3P30101 505 aaKnown RBP13.37□□□□□ -0.27
CAPN1-217ENST00000529133 SLC1A4P43007 532 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 TREML2Q5T2D2 321 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 GPAT2Q6NUI2 795 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 FASTKD5Q7L8L6 764 aaKnown RBP13.37□□□□□ -0.27
CAPN1-217ENST00000529133 CCDC144CPQ8IYA2 1237 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 ZNF274Q96GC6 653 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-217ENST00000529133 ZIC5Q96T25 663 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 MAP3K14Q99558 947 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 RPAP3Q9H6T3 665 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-217ENST00000529133 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-217ENST00000529133 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-217ENST00000529133 PARP1P09874 1014 aaKnown RBP13.36□□□□□ -0.27
CAPN1-217ENST00000529133 GOLGA8HP0CJ92 632 aa13.36□□□□□ -0.27
CAPN1-217ENST00000529133 METAP2P50579 478 aaKnown RBP eCLIP13.36□□□□□ -0.273e-8■■■■■ 34.2
CAPN1-217ENST00000529133 KIF23Q02241 960 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-217ENST00000529133 NOGQ13253 232 aa13.36□□□□□ -0.27
CAPN1-217ENST00000529133 ME3Q16798 604 aa13.36□□□□□ -0.27
CAPN1-217ENST00000529133 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
CAPN1-217ENST00000529133 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
CAPN1-217ENST00000529133 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-217ENST00000529133 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
CAPN1-217ENST00000529133 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
CAPN1-217ENST00000529133 PTPRFP10586 1907 aa13.36□□□□□ -0.27
CAPN1-217ENST00000529133 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 PFKFB2O60825 505 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 AOC2O75106 756 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 KIF5BP33176 963 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 MCM2P49736 904 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 VEGFBP49765 207 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 CCT2P78371 535 aaKnown RBP13.35□□□□□ -0.27
CAPN1-217ENST00000529133 STK3Q13188 491 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 RTN1Q16799 776 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 GPATCH4Q5T3I0 446 aaKnown RBP13.35□□□□□ -0.27
CAPN1-217ENST00000529133 TTBK2Q6IQ55 1244 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 SNX21Q969T3 373 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 PTPN18Q99952 460 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 FAM217BQ9NTX9 383 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-217ENST00000529133 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
CAPN1-217ENST00000529133 WDR33Q9C0J8 1336 aaKnown RBP13.35□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L15C9J2P7 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L13C9JLJ4 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 TMEM232C9JQI7 657 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L11C9JVI0 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L18D6R9N7 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L22D6RA61 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L17D6RBQ6 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L19D6RCP7 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L20D6RJB6 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 CDC27P30260 824 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-217ENST00000529133 USP17L24Q0WX57 530 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 SREBF2Q12772 1141 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 CATSPERGQ6ZRH7 1159 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 TMTC3Q6ZXV5 915 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 ANKRD23Q86SG2 305 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 NECAB1Q8N987 351 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-217ENST00000529133 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-217ENST00000529133 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
CAPN1-217ENST00000529133 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
CAPN1-217ENST00000529133 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
CAPN1-217ENST00000529133 KLRF2D3W0D1 207 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 PDHXO00330 501 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 IGF2BP3O00425 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
CAPN1-217ENST00000529133 FLOT1O75955 427 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 PLEKHA8P1O95397 391 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 SLC16A2P36021 539 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 GNAQP50148 359 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 INHBEP58166 350 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 SCRN1Q12765 414 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 PABPC4Q13310 644 aaKnown RBP eCLIP13.33□□□□□ -0.28
CAPN1-217ENST00000529133 SLC35G1Q2M3R5 365 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 FAM160B2Q86V87 743 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 GTF3C6Q969F1 213 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 SLF1Q9BQI6 1058 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 CPVLQ9H3G5 476 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 SH2B1Q9NRF2 756 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-217ENST00000529133 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 SLC45A1Q9Y2W3 748 aa13.33□□□□□ -0.28
CAPN1-217ENST00000529133 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 PLA2G6O60733 806 aa13.32□□□□□ -0.28
CAPN1-217ENST00000529133 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms