RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 PTPRAP18433 802 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 SLC1A4P43007 532 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 ZKSCAN4Q969J2 545 aaPredicted RBP13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 DDX11Q96FC9 970 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 WDR18Q9BV38 432 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 RNF26Q9BY78 433 aaPredicted RBP13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 VCPKMTQ9H867 229 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 CHMP5Q9NZZ3 219 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 ORC3Q9UBD5 711 aaPredicted RBP13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 MAD2L2Q9UI95 211 aa13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 POLR2AP24928 1970 aaKnown RBP13.69□□□□□ -0.22
TM9SF1-207ENST00000528895 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 USP17L10C9JJH3 530 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 F5H6K3 240 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 DEXIO95424 95 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 NDUFB10O96000 172 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 NUCB2P80303 420 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 KLRC3Q07444 240 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 ZNF543Q08ER8 600 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 VGLL4Q14135 290 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 LPAR1Q92633 364 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 KIAA1683Q9H0B3 1180 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 FAM217BQ9NTX9 383 aaPredicted RBP13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 SNCAIPQ9Y6H5 919 aa13.68□□□□□ -0.22
TM9SF1-207ENST00000528895 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 TMEM88BA6NKF7 163 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 TRAF5O00463 557 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 BMP3P12645 472 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 XBP1P17861 261 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 ECE1P42892 770 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 VEGFBP49765 207 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 TRIM29Q14134 588 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 NTRK3Q16288 839 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 DLK2Q6UY11 383 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 SIAH1Q8IUQ4 282 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 ZNF280CQ8ND82 737 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 ACER1Q8TDN7 264 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 PHKBQ93100 1093 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 GBA2Q9HCG7 927 aaPredicted RBP13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 PRDM10Q9NQV6 1147 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 FZD1Q9UP38 647 aa13.67□□□□□ -0.22
TM9SF1-207ENST00000528895 WDR46O15213 610 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 PRPF3O43395 683 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 CELF2O95319 508 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 DDIT3P35638 169 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 PPATQ06203 517 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 MTMR2Q13614 643 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 ZYXQ15942 572 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 ERO1BQ86YB8 467 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 C2orf69Q8N8R5 385 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 ZHX2Q9Y6X8 837 aa13.66□□□□□ -0.22
TM9SF1-207ENST00000528895 WDR33Q9C0J8 1336 aaKnown RBP13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 SPDYE5A6NIY4 337 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 C19orf81C9J6K1 198 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 H3BQV1 296 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 STX6O43752 255 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 CTCFP49711 727 aaPredicted RBP13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 BACE1P56817 501 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 SPP2Q13103 211 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 NBPF11Q86T75 865 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 SPICE1Q8N0Z3 855 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 SRBD1Q8N5C6 995 aaKnown RBP13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 RGS22Q8NE09 1264 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 C8orf76Q96K31 380 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 ELP3Q9H9T3 547 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 GPCPD1Q9NPB8 672 aa13.65□□□□□ -0.22
TM9SF1-207ENST00000528895 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
TM9SF1-207ENST00000528895 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
TM9SF1-207ENST00000528895 SYT1P21579 422 aa13.64□□□□□ -0.23
TM9SF1-207ENST00000528895 STAT2P52630 851 aa13.64□□□□□ -0.23
TM9SF1-207ENST00000528895 FUT2Q10981 343 aa13.64□□□□□ -0.23
TM9SF1-207ENST00000528895 FAM83BQ5T0W9 1011 aa13.64□□□□□ -0.23
TM9SF1-207ENST00000528895 FAM160B2Q86V87 743 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms