RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	KLRC3	Q07444	240 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	WDR78	Q5VTH9	848 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	PRPF38B	Q5VTL8	546 aa	Known RBP	13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	CWC27	Q6UX04	472 aa	Known RBP	13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	MKL1	Q969V6	931 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	APBA2	Q99767	749 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	NBPF3	Q9H094	633 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	CWC22	Q9HCG8	908 aa	Known RBP	13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	PCDH10	Q9P2E7	1040 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	PPP1R9A	Q9ULJ8	1098 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	SYNPO2	Q9UMS6	1093 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	ADAMTS5	Q9UNA0	930 aa		13.96	□□□□□ -0.17
PSMC3-205	ENST00000528362	SLC15A5	A6NIM6	579 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	TSPY2	A6NKD2	308 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	HIP1	O00291	1037 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	NMT2	O60551	498 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	RGS2	P41220	211 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	MFAP1	P55081	439 aa	Known RBP	13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	MAP2K5	Q13163	448 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	GRB14	Q14449	540 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	TMEM132B	Q14DG7	1078 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	CCL14	Q16627	93 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	GMCL1P1	Q8NEA9	526 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	SHCBP1	Q8NEM2	672 aa		13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	U2AF1L4	Q8WU68	220 aa	Known RBP	13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	PAK6	Q9NQU5	681 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	GREB1L	Q9C091	1923 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMC3-205	ENST00000528362	VWA5A	O00534	786 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	RANBP6	O60518	1105 aa	Known RBP	13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	ZKSCAN1	P17029	563 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	ERCC3	P19447	782 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	HAND2	P61296	217 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	PLS1	Q14651	629 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	MAP3K21	Q5TCX8	1036 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	TBC1D10C	Q8IV04	446 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	REPS2	Q8NFH8	660 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	NKX2-3	Q8TAU0	364 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	SLF1	Q9BQI6	1058 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	IL25	Q9H293	177 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	IL17RB	Q9NRM6	502 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	IVNS1ABP	Q9Y6Y0	642 aa		13.94	□□□□□ -0.18
PSMC3-205	ENST00000528362	HOXC6	P09630	235 aa		13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	PRKAR2A	P13861	404 aa	Known RBP	13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	NOV	P48745	357 aa		13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	UBE2Q1	Q7Z7E8	422 aa		13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	TRMT44	Q8IYL2	757 aa	Known RBP	13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	DEFB118	Q96PH6	123 aa		13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	FLRT1	Q9NZU1	646 aa		13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	ZNF214	Q9UL59	606 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	MGAM	O43451	1857 aa		13.93	□□□□□ -0.18
PSMC3-205	ENST00000528362	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	SGPL1	O95470	568 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	ADORA2A	P29274	412 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	RRP12	Q5JTH9	1297 aa	Known RBP	13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	PPP4R3B	Q5MIZ7	849 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	SLFN13	Q68D06	897 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	NCAPG2	Q86XI2	1143 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	RIOX2	Q8IUF8	465 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	NPLOC4	Q8TAT6	608 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	STAG1	Q8WVM7	1258 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	CRISPLD2	Q9H0B8	497 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	MROH8	Q9H579	483 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	TOMM22	Q9NS69	142 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	STX8	Q9UNK0	236 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362		A0A0G2JMZ2	1700 aa		13.92	□□□□□ -0.18
PSMC3-205	ENST00000528362	RPTOR	Q8N122	1335 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	STRN	O43815	780 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	COBL	O75128	1261 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	SLC25A27	O95847	323 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	IGHA2	P01877	340 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	PC	P11498	1178 aa	Known RBP	13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	CACNB2	Q08289	660 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	AKNAD1	Q5T1N1	836 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	RASGRP2	Q7LDG7	609 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	ABRA	Q8N0Z2	381 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	GMCL1	Q96IK5	515 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	DSCC1	Q9BVC3	393 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	HMX1	Q9NP08	348 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	FEM1B	Q9UK73	627 aa		13.91	□□□□□ -0.18
PSMC3-205	ENST00000528362	NEDD4	P46934	1319 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	PLXNB2	O15031	1838 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	RLF	Q13129	1914 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	BMP3	P12645	472 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	MCC	P23508	829 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	STAT3	P40763	770 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	MFSD6	Q6ZSS7	791 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	PRPF38A	Q8NAV1	312 aa	Known RBP	13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	KIFC2	Q96AC6	838 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	TEX13B	Q9BXU2	312 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	TCP11L1	Q9NUJ3	509 aa		13.9	□□□□□ -0.18
PSMC3-205	ENST00000528362	RAD50	Q92878	1312 aa		13.9	□□□□□ -0.19
PSMC3-205	ENST00000528362	ZNF213	O14771	459 aa		13.89	□□□□□ -0.19
PSMC3-205	ENST00000528362	FARP2	O94887	1054 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMC3-205	ENST00000528362	TFRC	P02786	760 aa	Known RBP	13.89	□□□□□ -0.19
PSMC3-205	ENST00000528362	FCER1A	P12319	257 aa		13.89	□□□□□ -0.19
PSMC3-205	ENST00000528362	CHML	P26374	656 aa		13.89	□□□□□ -0.19
PSMC3-205	ENST00000528362	CCND3	P30281	292 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMC3-205	ENST00000528362	SLC1A4	P43007	532 aa		13.89	□□□□□ -0.19
PSMC3-205	ENST00000528362	MFSD14C	Q5VZR4	134 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms