RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 LRRC47Q8N1G4 583 aaKnown RBP15.37■□□□□ 0.05
CNKSR1-211ENST00000528001 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
CNKSR1-211ENST00000528001 GPRC5AQ8NFJ5 357 aa15.37■□□□□ 0.05
CNKSR1-211ENST00000528001 PPP1R9AQ9ULJ8 1098 aa15.37■□□□□ 0.05
CNKSR1-211ENST00000528001 WDR19Q8NEZ3 1342 aa15.37■□□□□ 0.05
CNKSR1-211ENST00000528001 HSPA4P34932 840 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 SLC1A4P43007 532 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 FCGRTP55899 365 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 ERVK-9P63128 1117 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 ERVK-24P63145 666 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 SEC23AQ15436 765 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 FAM83BQ5T0W9 1011 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 FAM160B2Q86V87 743 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 ANKRD13CQ8N6S4 541 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 ENAHQ8N8S7 591 aaPredicted RBP15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 CD99L2Q8TCZ2 262 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 CHURC1Q8WUH1 139 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 SLF1Q9BQI6 1058 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 EFCC1Q9HA90 598 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 RLFQ13129 1914 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 TNKSO95271 1327 aa15.36■□□□□ 0.05
CNKSR1-211ENST00000528001 ERICH2A1L162 156 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 ATP2A1O14983 1001 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 HMGB1P09429 215 aaKnown RBP15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 HOXD10P28358 340 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 MAPK4P31152 587 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 MCM5P33992 734 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 COPB2P35606 906 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 GPATCH4Q5T3I0 446 aaKnown RBP15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 POTEEQ6S8J3 1075 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 TMTC2Q8N394 836 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 SHCBP1Q8NEM2 672 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 TMEM87BQ96K49 555 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 TXNRD2Q9NNW7 524 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 TAF6LQ9Y6J9 622 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 PARP14Q460N5 1801 aa15.35■□□□□ 0.05
CNKSR1-211ENST00000528001 CNMDO75829 334 aa15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 PDHBP11177 359 aa15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 PSMC4P43686 418 aa15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 STAT2P52630 851 aa15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 OAZ1P54368 228 aa15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 FBXO46Q6PJ61 603 aaPredicted RBP15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 CYB5R4Q7L1T6 521 aa15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 PNMA1Q8ND90 353 aa15.34■□□□□ 0.05
CNKSR1-211ENST00000528001 CASP8AP2Q9UKL3 1982 aa15.33■□□□□ 0.05
CNKSR1-211ENST00000528001 VWA5AO00534 786 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 MCCP23508 829 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 REPS2Q8NFH8 660 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 IGDCC4Q8TDY8 1250 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 COA7Q96BR5 231 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 ATG4CQ96DT6 458 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 TRIM47Q96LD4 638 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 MAP3K14Q99558 947 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 ZKSCAN3Q9BRR0 538 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 USP26Q9BXU7 913 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 SRRDQ9UH36 339 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 PNMA2Q9UL42 364 aa15.33■□□□□ 0.04
CNKSR1-211ENST00000528001 IFIT3O14879 490 aaKnown RBP15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 RAD21O60216 631 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 SLC25A27O95847 323 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 CTGFP29279 349 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 LIFRP42702 1097 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 ANTXR2P58335 489 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 ZNF543Q08ER8 600 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 Q3C1V9 767 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 FBXL16Q8N461 479 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 NEK1Q96PY6 1258 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 SPATC1LQ9H0A9 340 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 MROH8Q9H579 483 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 SLC38A10Q9HBR0 1119 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 FBXO28Q9NVF7 368 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 BTBD7Q9P203 1132 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 ZNF214Q9UL59 606 aaPredicted RBP15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 PTPN22Q9Y2R2 807 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
CNKSR1-211ENST00000528001 TMEM232C9JQI7 657 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 TNPO2O14787 897 aaKnown RBP15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 PRC1O43663 620 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 STRNO43815 780 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 ZBED4O75132 1171 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 FMNL1O95466 1100 aaPredicted RBP15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 PSMA5P28066 241 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 CAP1Q01518 475 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 IRF5Q13568 498 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 WTAPQ15007 396 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 DHX32Q7L7V1 743 aaKnown RBP15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 RASEFQ8IZ41 740 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 TNS4Q8IZW8 715 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 ABRAQ8N0Z2 381 aa15.31■□□□□ 0.04
CNKSR1-211ENST00000528001 SOCS4Q8WXH5 440 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms