RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 LRRC27Q9C0I9 530 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 CCDC8Q9H0W5 538 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 MMADHCQ9H3L0 296 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 TBC1D7Q9P0N9 293 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 RABL2AQ9UBK7 228 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 DACH1Q9UI36 760 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 TMEM98Q9Y2Y6 226 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 PEAK1Q9H792 1746 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 A0A1B0GTH6 734 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 PPFIA3O75145 1194 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 FDPSP14324 419 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 PDIA3P30101 505 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 CDC27P30260 824 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 CLNS1AP54105 237 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 ATP2B2Q01814 1243 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 RBL2Q08999 1139 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 SLC39A14Q15043 492 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 TAF7Q15545 349 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 CCDC40Q4G0X9 1142 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 TRAPPC11Q7Z392 1133 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 TRIML1Q8N9V2 468 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 EAF2Q96CJ1 260 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 ZNF274Q96GC6 653 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 RPGRIP1Q96KN7 1286 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 GDAP1L1Q96MZ0 367 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 DIS3Q9Y2L1 958 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 MAP3K19Q56UN5 1328 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 FAM237AA0A1B0GTK4 181 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 OPA1O60313 960 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 CYP11B2P19099 503 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 STIP1P31948 543 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 EXOSC10Q01780 885 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 DEUP1Q05D60 604 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 TMED1Q13445 227 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 SNCBQ16143 134 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 RRP12Q5JTH9 1297 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 OTUD7BQ6GQQ9 843 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 CCNI2Q6ZMN8 369 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 CCDC50Q8IVM0 306 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 B4GALNT2Q8NHY0 566 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 UHMK1Q8TAS1 419 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 TCP11Q8WWU5 503 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 CCDC51Q96ER9 411 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 TRIM11Q96F44 468 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 AGBL1Q96MI9 1066 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 TSGA10Q9BZW7 698 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 MAGEC2Q9UBF1 373 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 H7C1W4 665 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 ZEB2O60315 1214 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 MFAP3LO75121 409 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 KRT38O76015 456 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 EZRP15311 586 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 ZNF16P17020 682 aaPredicted RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 BMP6P22004 513 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 MARCKSP29966 332 aaPredicted RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 CA8P35219 290 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 FMR1Q06787 632 aaKnown RBP eCLIP8.35□□□□□ -1.07
SOX6-208ENST00000527619 CCDC102BQ68D86 513 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 MAGEC3Q8TD91 643 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 SAAL1Q96ER3 474 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 DUSP9Q99956 384 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 CENPHQ9H3R5 247 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 SLC40A1Q9NP59 571 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 TLR7Q9NYK1 1049 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 DDX20Q9UHI6 824 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 PCDHA5Q9Y5H7 936 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 MED1Q15648 1581 aaPredicted RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 RFX7Q2KHR2 1363 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 PLEKHG1Q9ULL1 1385 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 PPP6R2O75170 966 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 EPB41P11171 864 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 VDRP11473 427 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 FECHP22830 423 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 CKAP4Q07065 602 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 G3BP1Q13283 466 aaKnown RBP eCLIP8.35□□□□□ -1.07
SOX6-208ENST00000527619 DRP2Q13474 957 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 RESP18Q5W5W9 173 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 SHC4Q6S5L8 630 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 C11orf96Q7Z7L8 435 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 CNGA4Q8IV77 575 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 FOXP4Q8IVH2 680 aaPredicted RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 GSPT2Q8IYD1 628 aaKnown RBP8.35□□□□□ -1.07
SOX6-208ENST00000527619 CCDC13Q8IYE1 715 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 MLKLQ8NB16 471 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 PHACTR1Q9C0D0 580 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 ATP6V0A4Q9HBG4 840 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 HOMER3Q9NSC5 361 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 BABAM1Q9NWV8 329 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
SOX6-208ENST00000527619 TPPPO94811 219 aa8.34□□□□□ -1.07
SOX6-208ENST00000527619 ABL1P00519 1130 aa8.34□□□□□ -1.07
SOX6-208ENST00000527619 MAGEA10P43363 369 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms