RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 TMEM67Q5HYA8 995 aa12.42□□□□□ -0.42
CTNND1-217ENST00000527599 CCDC81Q6ZN84 652 aa12.42□□□□□ -0.42
CTNND1-217ENST00000527599 KRTAP1-3Q8IUG1 177 aa12.42□□□□□ -0.42
CTNND1-217ENST00000527599 TCTN2Q96GX1 697 aa12.42□□□□□ -0.42
CTNND1-217ENST00000527599 ASCC2Q9H1I8 757 aaPredicted RBP12.42□□□□□ -0.42
CTNND1-217ENST00000527599 C9IYK1 514 aa12.41□□□□□ -0.42
CTNND1-217ENST00000527599 ZYXQ15942 572 aaKnown RBP12.41□□□□□ -0.42
CTNND1-217ENST00000527599 FBXW10Q5XX13 1052 aa12.41□□□□□ -0.42
CTNND1-217ENST00000527599 TAB3Q8N5C8 712 aaPredicted RBP12.41□□□□□ -0.42
CTNND1-217ENST00000527599 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
CTNND1-217ENST00000527599 SUCOQ9UBS9 1254 aaKnown RBP12.41□□□□□ -0.42
CTNND1-217ENST00000527599 EFR3BQ9Y2G0 817 aa12.41□□□□□ -0.42
CTNND1-217ENST00000527599 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 SIGLEC6O43699 453 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 C8AP07357 584 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 SOX9P48436 509 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 MESP2Q0VG99 397 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 TIGD5Q53EQ6 642 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 LSRQ86X29 649 aaPredicted RBP12.4□□□□□ -0.42
CTNND1-217ENST00000527599 ABHD4Q8TB40 342 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 G6PC3Q9BUM1 346 aa12.4□□□□□ -0.42
CTNND1-217ENST00000527599 MLANAQ16655 118 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 PRR23BQ6ZRT6 265 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 PPFIBP1Q86W92 1011 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 ZNF655Q8N720 491 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-217ENST00000527599 RASGRP4Q8TDF6 673 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 MYLIPQ8WY64 445 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 GPRASP2Q96D09 838 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 TM9SF2Q99805 663 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 FOXP3Q9BZS1 431 aa12.39□□□□□ -0.43
CTNND1-217ENST00000527599 MKRN2Q9H000 416 aaKnown RBP12.39□□□□□ -0.43
CTNND1-217ENST00000527599 TMEM82A0PJX8 343 aa12.38□□□□□ -0.43
CTNND1-217ENST00000527599 SHOXO15266 292 aa12.38□□□□□ -0.43
CTNND1-217ENST00000527599 PDZD8Q8NEN9 1154 aa12.38□□□□□ -0.43
CTNND1-217ENST00000527599 LINC01599Q8WXQ3 324 aa12.38□□□□□ -0.43
CTNND1-217ENST00000527599 RAC2P15153 192 aa12.37□□□□□ -0.43
CTNND1-217ENST00000527599 GJA8P48165 433 aa12.37□□□□□ -0.43
CTNND1-217ENST00000527599 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
CTNND1-217ENST00000527599 BBS9Q3SYG4 887 aa12.37□□□□□ -0.43
CTNND1-217ENST00000527599 UNC5AQ6ZN44 842 aa12.37□□□□□ -0.43
CTNND1-217ENST00000527599 RNF111Q6ZNA4 994 aa12.37□□□□□ -0.43
CTNND1-217ENST00000527599 GFOD1Q9NXC2 390 aa12.37□□□□□ -0.43
CTNND1-217ENST00000527599 COL9A2Q14055 689 aaPredicted RBP12.36□□□□□ -0.43
CTNND1-217ENST00000527599 TDRD10Q5VZ19 366 aaKnown RBP12.36□□□□□ -0.43
CTNND1-217ENST00000527599 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
CTNND1-217ENST00000527599 ACBD3Q9H3P7 528 aa12.36□□□□□ -0.43
CTNND1-217ENST00000527599 CHST7Q9NS84 486 aa12.36□□□□□ -0.43
CTNND1-217ENST00000527599 FAM53CQ9NYF3 392 aa12.36□□□□□ -0.43
CTNND1-217ENST00000527599 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
CTNND1-217ENST00000527599 NOTOA8MTQ0 251 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
CTNND1-217ENST00000527599 GUCY2CP25092 1073 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 CTSKP43235 329 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 PMS1P54277 932 aaKnown RBP12.35□□□□□ -0.43
CTNND1-217ENST00000527599 ZPBP2Q6X784 338 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 DHRS1Q96LJ7 313 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 RNF32Q9H0A6 362 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 KCNK12Q9HB15 430 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 PCDHB12Q9Y5F1 795 aa12.35□□□□□ -0.43
CTNND1-217ENST00000527599 MEIS1O00470 390 aa12.34□□□□□ -0.43
CTNND1-217ENST00000527599 EFEMP2O95967 443 aa12.34□□□□□ -0.43
CTNND1-217ENST00000527599 SYPP08247 313 aa12.34□□□□□ -0.43
CTNND1-217ENST00000527599 MPZL3Q6UWV2 235 aa12.34□□□□□ -0.43
CTNND1-217ENST00000527599 DHX38Q92620 1227 aaKnown RBP12.34□□□□□ -0.43
CTNND1-217ENST00000527599 FBXL21Q9UKT6 434 aa12.34□□□□□ -0.43
CTNND1-217ENST00000527599 CCDC9Q9Y3X0 531 aaKnown RBP12.34□□□□□ -0.43
CTNND1-217ENST00000527599 LTBP3Q9NS15 1303 aa12.34□□□□□ -0.43
CTNND1-217ENST00000527599 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
CTNND1-217ENST00000527599 RPL10P27635 214 aaKnown RBP12.33□□□□□ -0.44
CTNND1-217ENST00000527599 NR0B2Q15466 257 aa12.33□□□□□ -0.44
CTNND1-217ENST00000527599 ZNF124Q15973 351 aa12.33□□□□□ -0.44
CTNND1-217ENST00000527599 AXDND1Q5T1B0 1012 aaPredicted RBP12.33□□□□□ -0.44
CTNND1-217ENST00000527599 C7orf61Q8IZ16 206 aa12.33□□□□□ -0.44
CTNND1-217ENST00000527599 TGIF2Q9GZN2 237 aa12.33□□□□□ -0.44
CTNND1-217ENST00000527599 FKTNO75072 461 aa12.32□□□□□ -0.44
CTNND1-217ENST00000527599 PCBP3P57721 371 aaKnown RBP12.32□□□□□ -0.44
CTNND1-217ENST00000527599 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
CTNND1-217ENST00000527599 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
CTNND1-217ENST00000527599 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
CTNND1-217ENST00000527599 OXR1Q8N573 874 aa12.32□□□□□ -0.44
CTNND1-217ENST00000527599 SPATA32Q96LK8 384 aa12.32□□□□□ -0.44
CTNND1-217ENST00000527599 FITM1A5D6W6 292 aa12.31□□□□□ -0.44
CTNND1-217ENST00000527599 GIPRP48546 466 aa12.31□□□□□ -0.44
CTNND1-217ENST00000527599 FAM86C1Q9NVL1 165 aa12.31□□□□□ -0.44
CTNND1-217ENST00000527599 PSPNO60542 156 aa12.3□□□□□ -0.44
CTNND1-217ENST00000527599 SHISA4Q96DD7 197 aa12.3□□□□□ -0.44
CTNND1-217ENST00000527599 DIRC2Q96SL1 478 aa12.3□□□□□ -0.44
CTNND1-217ENST00000527599 ZNF214Q9UL59 606 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-217ENST00000527599 TP53P04637 393 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-217ENST00000527599 NASPP49321 788 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-217ENST00000527599 EIF6P56537 245 aaKnown RBP12.29□□□□□ -0.44
CTNND1-217ENST00000527599 DUSP4Q13115 394 aa12.29□□□□□ -0.44
CTNND1-217ENST00000527599 LILRA2Q8N149 483 aa12.29□□□□□ -0.44
CTNND1-217ENST00000527599 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
CTNND1-217ENST00000527599 SRRTQ9BXP5 876 aaKnown RBP12.29□□□□□ -0.44
CTNND1-217ENST00000527599 NSUN3Q9H649 340 aaKnown RBP12.29□□□□□ -0.44
CTNND1-217ENST00000527599 USP2O75604 605 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-217ENST00000527599 GALK1P51570 392 aa12.28□□□□□ -0.44
CTNND1-217ENST00000527599 CRTC3Q6UUV7 619 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms