RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 C4orf46Q504U0 113 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 HSP90AB4PQ58FF6 505 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 SPTY2D1Q68D10 685 aaPredicted RBP5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 TPTE2Q6XPS3 522 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 TSHZ1Q6ZSZ6 1077 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 PRRT2Q7Z6L0 340 aaPredicted RBP5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 TOP6BLQ8N6T0 577 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 ANAPC16Q96DE5 110 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 EAF1Q96JC9 268 aaPredicted RBP5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 CEP89Q96ST8 783 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 FEZ1Q99689 392 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 TMPRSS5Q9H3S3 457 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 ZNF576Q9H609 170 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 SSU72Q9NP77 194 aaKnown RBP5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 HOMER2Q9NSB8 354 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 PCOLCE2Q9UKZ9 415 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 R3HCC1Q9Y3T6 440 aaKnown RBP5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 EID1Q9Y6B2 187 aa5.09□□□□□ -1.59
CLNS1A-208ENST00000527265 GNAT3A8MTJ3 354 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 F6X3S4 739 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 ECEL1O95672 775 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 CENPBP07199 599 aaPredicted RBP5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 VIL1P09327 827 aaKnown RBP5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 RAC2P15153 192 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 CDKN1CP49918 316 aaPredicted RBP5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 CLCN7P51798 805 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 SQSTM1Q13501 440 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 C16orf86Q6ZW13 317 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 CELF2-AS1Q8N7Q2 184 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 ANKRD24Q8TF21 1146 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 FANCD2OSQ96PS1 177 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 TRIM56Q9BRZ2 755 aaKnown RBP5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 RSRP1Q9BUV0 290 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 NOC4LQ9BVI4 516 aaKnown RBP5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 CEP44Q9C0F1 390 aa5.08□□□□□ -1.6
CLNS1A-208ENST00000527265 CNTNAP4Q9C0A0 1308 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 CELA3AP09093 270 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 PAX3P23760 479 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 EVA1CP58658 441 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 FAAP100Q0VG06 881 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 IFRD2Q12894 506 aaPredicted RBP5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 RPS26P11Q5JNZ5 115 aaPredicted RBP5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 SV2BQ7L1I2 683 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 TEX2Q8IWB9 1127 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 TSR2Q969E8 191 aaKnown RBP5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 CCDC113Q9H0I3 377 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 TCEAL9Q9UHQ7 104 aa5.07□□□□□ -1.6
CLNS1A-208ENST00000527265 A0A0G2JLL6 359 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 MINDY4BA8MYZ0 360 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 IGF2BP3O00425 579 aaKnown RBP eCLIP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 SMAD7O15105 426 aaKnown RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 B3GALT4O96024 378 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 EIF4A3P38919 411 aaKnown RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 ZNF157P51786 506 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 EXOSC10Q01780 885 aaKnown RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 COL9A2Q14055 689 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 UBE4AQ14139 1066 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 TTLL4Q14679 1199 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 MAP3K11Q16584 847 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 MAP9Q49MG5 647 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 BRDTQ58F21 947 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 CCSAPQ6IQ19 270 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 KRT26Q7Z3Y9 468 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 JAMLQ86YT9 394 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 SPACA3Q8IXA5 215 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 ZNF296Q8WUU4 475 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 CPLX3Q8WVH0 158 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 FAM126AQ9BYI3 521 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 CARS2Q9HA77 564 aaKnown RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 TERF2IPQ9NYB0 399 aa5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 GPN3Q9UHW5 284 aaPredicted RBP5.06□□□□□ -1.6
CLNS1A-208ENST00000527265 ENC1O14682 589 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 SH3BP5O60239 455 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 LIG1P18858 919 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 GBP2P32456 591 aaPredicted RBP5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 GNALP38405 381 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 PWP1Q13610 501 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 DDR2Q16832 855 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 C2orf27AQ580R0 203 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 TNNI3KQ59H18 835 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 PCNX4Q63HM2 1172 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 GGNQ86UU5 652 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 RELL1Q8IUW5 271 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 WDR75Q8IWA0 830 aaKnown RBP5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 SHDQ96IW2 340 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 NECAB3Q96P71 396 aaPredicted RBP5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 NT5C1AQ9BXI3 368 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 SRRTQ9BXP5 876 aaKnown RBP5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 TMEM39AQ9NV64 488 aa5.05□□□□□ -1.6
CLNS1A-208ENST00000527265 PITPNM2Q9BZ72 1349 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 HMGB1P1B2RPK0 211 aaPredicted RBP5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 PDPK1O15530 556 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 PAGE1O75459 146 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 ADRB1P08588 477 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 LIG3P49916 1009 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 PPP2R3AQ06190 1150 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 RASGRF1Q13972 1273 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 TCERG1LQ5VWI1 586 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 CCDC81Q6ZN84 652 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms