RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TRIM75PA6NK02 468 aa18.58■□□□□ 0.56
SNRNP35-204ENST00000527158 USP17L5A8MUK1 530 aa18.58■□□□□ 0.56
SNRNP35-204ENST00000527158 NPY5RQ15761 445 aa18.58■□□□□ 0.56
SNRNP35-204ENST00000527158 CERKLQ49MI3 558 aaPredicted RBP18.58■□□□□ 0.56
SNRNP35-204ENST00000527158 SH3BP5LQ7L8J4 393 aa18.58■□□□□ 0.56
SNRNP35-204ENST00000527158 SDF4Q9BRK5 362 aa18.58■□□□□ 0.56
SNRNP35-204ENST00000527158 TAOK3Q9H2K8 898 aa18.58■□□□□ 0.56
SNRNP35-204ENST00000527158 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 PDHBP11177 359 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 VEGFAP15692 232 aaPredicted RBP18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 ASPRV1Q53RT3 343 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 HEATR3Q7Z4Q2 680 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 LRRC47Q8N1G4 583 aaKnown RBP18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 AGBL3Q8NEM8 1001 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 JDP2Q8WYK2 163 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 GPKOWQ92917 476 aaPredicted RBP eCLIP18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 TNFRSF25Q93038 417 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 RRP36Q96EU6 259 aaKnown RBP18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 DNAJC18Q9H819 358 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 SEC63Q9UGP8 760 aaKnown RBP18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 PFKFB1P16118 471 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 GALNT17Q6IS24 598 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 BLIDQ8IZY5 108 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 BARHL2Q9NY43 387 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 CD2APQ9Y5K6 639 aa18.57■□□□□ 0.56
SNRNP35-204ENST00000527158 ZNF202O95125 648 aa18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 BMP15O95972 392 aa18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 SLC35G1Q2M3R5 365 aa18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 TATDN1Q6P1N9 297 aa18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 CCDC12Q8WUD4 166 aaPredicted RBP18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 PCDHA4Q9UN74 947 aa18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 ATRNL1Q5VV63 1379 aa18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 PSME4Q14997 1843 aa18.56■□□□□ 0.56
SNRNP35-204ENST00000527158 ATP2B2Q01814 1243 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 EARS2Q5JPH6 523 aaKnown RBP18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 RESP18Q5W5W9 173 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 WWC2Q6AWC2 1192 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 SHC4Q6S5L8 630 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 CLIC6Q96NY7 704 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 MAP7D2Q96T17 732 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 KANSL2Q9H9L4 492 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 MYH8P13535 1937 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 COL4A5P29400 1685 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 FAM205CA6NFA0 338 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 SNHG28P0DPA3 235 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 PTPREP23469 700 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 SYKP43405 635 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 TRAPPC10P48553 1259 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 RASGRP2Q7LDG7 609 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 METTL16Q86W50 562 aaKnown RBP18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 CLEC10AQ8IUN9 316 aa18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 MORC2Q9Y6X9 1032 aaPredicted RBP18.55■□□□□ 0.56
SNRNP35-204ENST00000527158 FAM196BA6NMK8 535 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 STXBP3O00186 592 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 TPM3P06753 285 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 CXCL9Q07325 125 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 PIK3AP1Q6ZUJ8 805 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 CSRNP1Q96S65 589 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 ZNF70Q9UC06 446 aaPredicted RBP18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 COL2A1P02458 1487 aaPredicted RBP18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 FAM237AA0A1B0GTK4 181 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 TCP10L2B9ZVM9 353 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 CAVIN2O95810 425 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 TTC38Q5R3I4 469 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 CIAPIN1Q6FI81 312 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 ZNF579Q8NAF0 562 aaKnown RBP18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 FAM200AQ8TCP9 573 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 TIGD1Q96MW7 591 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 FAM13BQ9NYF5 915 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 BAZ2BQ9UIF8 2168 aaKnown RBP18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 FBXO2Q9UK22 296 aaPredicted RBP18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 HPSEQ9Y251 543 aa18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 SRPRBQ9Y5M8 271 aaKnown RBP18.54■□□□□ 0.56
SNRNP35-204ENST00000527158 CLRN2A0PK11 232 aa18.53■□□□□ 0.56
SNRNP35-204ENST00000527158 ANO6Q4KMQ2 910 aa18.53■□□□□ 0.56
SNRNP35-204ENST00000527158 TMEM179Q6ZVK1 233 aa18.53■□□□□ 0.56
SNRNP35-204ENST00000527158 DAGLBQ8NCG7 672 aa18.53■□□□□ 0.56
SNRNP35-204ENST00000527158 NYAP2Q9P242 653 aa18.53■□□□□ 0.56
SNRNP35-204ENST00000527158 BCS1LQ9Y276 419 aa18.53■□□□□ 0.56
SNRNP35-204ENST00000527158 MYO1BO43795 1136 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 NAPAP54920 295 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 ZNF543Q08ER8 600 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 TNIP1Q15025 636 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 ABCB5Q2M3G0 1257 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 GPATCH4Q5T3I0 446 aaKnown RBP18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 MTMR14Q8NCE2 650 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 FAM151AQ8WW52 585 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 HERC5Q9UII4 1024 aaKnown RBP18.52■□□□□ 0.56
SNRNP35-204ENST00000527158 TYW1BQ6NUM6 668 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms