RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 CHMLP26374 656 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 GCLCP48506 637 aaPredicted RBP10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP14P54578 494 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 TFAP4Q01664 338 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 ATP2B2Q01814 1243 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 USP17L24Q0WX57 530 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 FAM110CQ1W6H9 321 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 TBC1D10CQ8IV04 446 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 NEDD1Q8NHV4 660 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 SH3TC2Q8TF17 1288 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 CEP95Q96GE4 821 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 NUP88Q99567 741 aaPredicted RBP10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 PORCNQ9H237 461 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 VCPKMTQ9H867 229 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 SRRDQ9UH36 339 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
CCDC90B-208ENST00000527025 COL11A1P12107 1806 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 A0A0G2JMZ2 1700 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 SOX10P56693 466 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 PTH1RQ03431 593 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 PABPC4Q13310 644 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 RASGRP2Q7LDG7 609 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 ZNF444Q8N0Y2 327 aaPredicted RBP10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 MKL1Q969V6 931 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 ARMC5Q96C12 935 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 FBXO28Q9NVF7 368 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 MTMR4Q9NYA4 1195 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 NYAP2Q9P242 653 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 CLIP2Q9UDT6 1046 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 TAF6LQ9Y6J9 622 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 LAMA4Q16363 1823 aa10.54□□□□□ -0.72
CCDC90B-208ENST00000527025 F5H6K3 240 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 ORC4O43929 436 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 NOVP48745 357 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 FLT3LGP49771 235 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 FCGRTP55899 365 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 ERVK-24P63145 666 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 KLRC3Q07444 240 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 COG2Q14746 738 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 KIF22Q14807 665 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 FAM83BQ5T0W9 1011 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 LBX2Q6XYB7 198 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 GPRC5AQ8NFJ5 357 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 CHMP4CQ96CF2 233 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 ARHGEF10LQ9HCE6 1279 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 ADAMTS5Q9UNA0 930 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 ZMYM6O95789 1325 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 MYPNQ86TC9 1320 aa10.53□□□□□ -0.72
CCDC90B-208ENST00000527025 PLIN4Q96Q06 1357 aa10.52□□□□□ -0.72
CCDC90B-208ENST00000527025 TNPO2O14787 897 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 NDUFB10O96000 172 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 GNRH1P01148 92 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 TSPY3P0CV98 308 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 TSPY8P0CW00 308 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 ELNP15502 786 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 RGS19P49795 217 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 PDE4BQ07343 736 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 MTFR1Q15390 333 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 LRRC47Q8N1G4 583 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 LPAR1Q92633 364 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 ATG4CQ96DT6 458 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 ZNF333Q96JL9 665 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 TANGO6Q9C0B7 1094 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 RABGAP1Q9Y3P9 1069 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 NEDD4P46934 1319 aa10.52□□□□□ -0.73
CCDC90B-208ENST00000527025 HIP1O00291 1037 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 WDR46O15213 610 aaKnown RBP10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 RANBP6O60518 1105 aaKnown RBP10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 TRIM32Q13049 653 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 COL9A3Q14050 684 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 RRP12Q5JTH9 1297 aaKnown RBP10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 REPS2Q8NFH8 660 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 USP6NLQ92738 828 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 DSCC1Q9BVC3 393 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 HOXC10Q9NYD6 342 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 GTF3C3Q9Y5Q9 886 aa10.51□□□□□ -0.73
CCDC90B-208ENST00000527025 RBBP6Q7Z6E9 1792 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 TSPY2A6NKD2 308 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 SGSM2O43147 1006 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 RAD21O60216 631 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 FLOT1O75955 427 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 TTLL1O95922 423 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 SLC3A2P08195 630 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 PRMT2P55345 433 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 TMEM132BQ14DG7 1078 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 ARHGEF6Q15052 776 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 SLC9C1Q4G0N8 1177 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 MORN1Q5T089 497 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 GPR142Q7Z601 462 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms