RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TC2NQ8N9U0 490 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 STAMQ92783 540 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 MTRQ99707 1265 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 MKNK2Q9HBH9 465 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 A0A1B0GTH6 734 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 CYTH3O43739 400 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 BAG3O95817 575 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 SPATA1Q5VX52 437 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 REXO1L1PQ8IX06 675 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 L2HGDHQ9H9P8 463 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 MYH1P12882 1939 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 SYNRGQ9UMZ2 1314 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 SNED1Q8TER0 1413 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 RASA1P20936 1047 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 CRY2Q49AN0 593 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 MAPKAPK5Q8IW41 473 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 CERKQ8TCT0 537 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 RASGRP4Q8TDF6 673 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 BCL11BQ9C0K0 894 aaPredicted RBP19.97■□□□□ 0.79
USH1C-205ENST00000527020 CD209Q9NNX6 404 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 SAP30BPQ9UHR5 308 aaKnown RBP19.97■□□□□ 0.79
USH1C-205ENST00000527020 PCDHA4Q9UN74 947 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 TSPY3P0CV98 308 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 TSPY8P0CW00 308 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 KLHL10Q6JEL2 608 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 TRIM65Q6PJ69 517 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 FCHSD1Q86WN1 690 aa19.97■□□□□ 0.79
USH1C-205ENST00000527020 FOCADQ5VW36 1801 aa19.96■□□□□ 0.79
USH1C-205ENST00000527020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.96■□□□□ 0.79
USH1C-205ENST00000527020 STX17P56962 302 aa19.96■□□□□ 0.79
USH1C-205ENST00000527020 CCDC93Q567U6 631 aa19.96■□□□□ 0.79
USH1C-205ENST00000527020 WWC2Q6AWC2 1192 aa19.96■□□□□ 0.79
USH1C-205ENST00000527020 IQUBQ8NA54 791 aa19.96■□□□□ 0.79
USH1C-205ENST00000527020 TMEM47Q9BQJ4 181 aa19.96■□□□□ 0.79
USH1C-205ENST00000527020 EP400Q96L91 3159 aa19.96■□□□□ 0.79
USH1C-205ENST00000527020 FANCGO15287 622 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 ARHGAP6O43182 974 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 LDHCP07864 332 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 ARL6IP4Q66PJ3 421 aaKnown RBP19.95■□□□□ 0.78
USH1C-205ENST00000527020 RPGRQ92834 1020 aaKnown RBP19.95■□□□□ 0.78
USH1C-205ENST00000527020 BLZF1Q9H2G9 400 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 PALM3A6NDB9 673 aaPredicted RBP19.95■□□□□ 0.78
USH1C-205ENST00000527020 TEX33O43247 280 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 CCP110O43303 1012 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 UFL1O94874 794 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 TUBB4AP04350 444 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 IL1R1P14778 569 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 BTDP43251 543 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 ADKP55263 362 aaKnown RBP19.95■□□□□ 0.78
USH1C-205ENST00000527020 ETF1P62495 437 aaKnown RBP19.95■□□□□ 0.78
USH1C-205ENST00000527020 CCDC178Q5BJE1 867 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 GJD4Q96KN9 370 aaPredicted RBP19.95■□□□□ 0.78
USH1C-205ENST00000527020 LTBP1Q14766 1721 aa19.95■□□□□ 0.78
USH1C-205ENST00000527020 SLU7O95391 586 aaKnown RBP19.94■□□□□ 0.78
USH1C-205ENST00000527020 GYS1P13807 737 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 ADRA2BP18089 450 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 GNAQP50148 359 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 RASGRP2Q7LDG7 609 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 AMOTL1Q8IY63 956 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 ZNF444Q8N0Y2 327 aaPredicted RBP19.94■□□□□ 0.78
USH1C-205ENST00000527020 BAG1Q99933 345 aaPredicted RBP19.94■□□□□ 0.78
USH1C-205ENST00000527020 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.94■□□□□ 0.78
USH1C-205ENST00000527020 PCDHA6Q9UN73 950 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 PCDHA8Q9Y5H6 950 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 V9GYY5 206 aaPredicted RBP19.94■□□□□ 0.78
USH1C-205ENST00000527020 SPATA31A6Q5VVP1 1343 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 GPR75-ASB3A0A0A6YYF3 556 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 STXBP3O00186 592 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 DAGLBQ8NCG7 672 aa19.94■□□□□ 0.78
USH1C-205ENST00000527020 GTPBP6O43824 516 aaPredicted RBP19.93■□□□□ 0.78
USH1C-205ENST00000527020 STX10O60499 249 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 LONP1P36776 959 aaKnown RBP19.93■□□□□ 0.78
USH1C-205ENST00000527020 PBX1P40424 430 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 ADD3Q9UEY8 706 aaKnown RBP19.93■□□□□ 0.78
USH1C-205ENST00000527020 PPP2R2CQ9Y2T4 447 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 PHLPP2Q6ZVD8 1323 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 ATP2B4P23634 1241 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 CDC25AP30304 524 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 C16orf86Q6ZW13 317 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 HOMER1Q86YM7 354 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 TMEM60Q9H2L4 133 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 BARHL2Q9NY43 387 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 STX8Q9UNK0 236 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 MTMR7Q9Y216 660 aa19.93■□□□□ 0.78
USH1C-205ENST00000527020 CDK8P49336 464 aa19.92■□□□□ 0.78
USH1C-205ENST00000527020 LRRN4CLQ8ND94 238 aa19.92■□□□□ 0.78
USH1C-205ENST00000527020 PYM1Q9BRP8 204 aaKnown RBP19.92■□□□□ 0.78
USH1C-205ENST00000527020 GGA1Q9UJY5 639 aa19.92■□□□□ 0.78
USH1C-205ENST00000527020 CTNND2Q9UQB3 1225 aa19.92■□□□□ 0.78
USH1C-205ENST00000527020 LRRC37AA6NMS7 1700 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 COBLO75128 1261 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 SERPINB2P05120 415 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 GOLGA8HP0CJ92 632 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 RHBDL3P58872 404 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 TOGARAM2Q6ZUX3 1019 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 HEATR3Q7Z4Q2 680 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 CPVLQ9H3G5 476 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 CGNQ9P2M7 1197 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms