RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ATG4CQ96DT6 458 aa19.14■□□□□ 0.65
SSSCA1-202ENST00000526433 PORCNQ9H237 461 aa19.14■□□□□ 0.65
SSSCA1-202ENST00000526433 KDM4AO75164 1064 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 CDC45O75419 566 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 CYP21A2P08686 494 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 FLT3LGP49771 235 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 NT5C2P49902 561 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 CCNA1P78396 465 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 PRKCZQ05513 592 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 RAET1EQ8TD07 263 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 TTC14Q96N46 770 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 KRT23Q9C075 422 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 LSG1Q9H089 658 aaKnown RBP19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 ZSWIM5Q9P217 1185 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 RBM8AQ9Y5S9 174 aaKnown RBP19.13■□□□□ 0.65
SSSCA1-202ENST00000526433 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 BMP3P12645 472 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 MCCP23508 829 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 MAPK4P31152 587 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 CASC1Q6TDU7 716 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 MB21D1Q8N884 522 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 CHMP4CQ96CF2 233 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 TMEM47Q9BQJ4 181 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 ZKSCAN3Q9BRR0 538 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 CNNM2Q9H8M5 875 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 GJD2Q9UKL4 321 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 PPP1R9AQ9ULJ8 1098 aa19.12■□□□□ 0.65
SSSCA1-202ENST00000526433 PARP14Q460N5 1801 aa19.11■□□□□ 0.65
SSSCA1-202ENST00000526433 SLC9C1Q4G0N8 1177 aa19.11■□□□□ 0.65
SSSCA1-202ENST00000526433 RCSD1Q6JBY9 416 aa19.11■□□□□ 0.65
SSSCA1-202ENST00000526433 PRPF38AQ8NAV1 312 aaKnown RBP19.11■□□□□ 0.65
SSSCA1-202ENST00000526433 SLF1Q9BQI6 1058 aa19.11■□□□□ 0.65
SSSCA1-202ENST00000526433 FEM1BQ9UK73 627 aa19.11■□□□□ 0.65
SSSCA1-202ENST00000526433 VWA5AO00534 786 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 SLC1A4P43007 532 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 PLS1Q14651 629 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 CCDC178Q5BJE1 867 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 PLEKHH3Q7Z736 793 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 NBPF11Q86T75 865 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 IQCA1Q86XH1 822 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 ARMC5Q96C12 935 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 GMCL1Q96IK5 515 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 SPATC1LQ9H0A9 340 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 CWC22Q9HCG8 908 aaKnown RBP19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 ANO2Q9NQ90 1003 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 MTMR7Q9Y216 660 aa19.1■□□□□ 0.65
SSSCA1-202ENST00000526433 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 E7EWF7 191 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 GRK4P32298 578 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 TRDNQ13061 729 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 IRF5Q13568 498 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 TMEM132BQ14DG7 1078 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 WDR78Q5VTH9 848 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 GPR142Q7Z601 462 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 DGKHQ86XP1 1220 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 SH3TC2Q8TF17 1288 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 ZSCAN10Q96SZ4 725 aaPredicted RBP19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 ISY1Q9ULR0 285 aaKnown RBP19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
SSSCA1-202ENST00000526433 ADCY3O60266 1144 aa19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 KCTD1Q719H9 257 aa19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 CHURC1Q8WUH1 139 aa19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 ANKS1AQ92625 1134 aa19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 KIFC2Q96AC6 838 aa19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 NUDT12Q9BQG2 462 aa19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 COL11A1P12107 1806 aaPredicted RBP19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 HTTP42858 3142 aa19.08■□□□□ 0.64
SSSCA1-202ENST00000526433 ZBED4O75132 1171 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 PTPREP23469 700 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 NECTIN1Q15223 517 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 MORN1Q5T089 497 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 STOX1Q6ZVD7 989 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 CYB5R4Q7L1T6 521 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 SHCBP1Q8NEM2 672 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 REPS2Q8NFH8 660 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 DCAF4Q8WV16 495 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 PLXNB2O15031 1838 aa19.07■□□□□ 0.64
SSSCA1-202ENST00000526433 A0A0G2JMZ2 1700 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 SLC27A2O14975 620 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 PLA2G6O60733 806 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 ELNP15502 786 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 ERCC3P19447 782 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 CYP2B6P20813 491 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 STAT3P40763 770 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 IKQ13123 557 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 RASGRP2Q7LDG7 609 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 FAM160B2Q86V87 743 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 NCAPG2Q86XI2 1143 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 ENAHQ8N8S7 591 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 SLAIN1Q8ND83 568 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 NCOA7Q8NI08 942 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 PXYLP1Q8TE99 480 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 USP6NLQ92738 828 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 ZNF333Q96JL9 665 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 UBAC1Q9BSL1 405 aa19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 BIN2Q9UBW5 565 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 CTDP1Q9Y5B0 961 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-202ENST00000526433 KIAA0100Q14667 2235 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms