RNA–Protein interactions for RNA: ENST00000526131.1

AP004247.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP004247.2, Length 1,890 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.2-201ENST00000526131 FBXO28Q9NVF7 368 aa12.97□□□□□ -0.33
AP004247.2-201ENST00000526131 KCNH4Q9UQ05 1017 aa12.97□□□□□ -0.33
AP004247.2-201ENST00000526131 C19orf81C9J6K1 198 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 BTBD19C9JJ37 291 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 CXCL11O14625 94 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 PEX10O60683 326 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 CYP2C8P10632 490 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 SLC4A3P48751 1232 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 SNAP25P60880 206 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 NOGQ13253 232 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 TTBK2Q6IQ55 1244 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
AP004247.2-201ENST00000526131 MANSC4A6NHS7 340 aaPredicted RBP12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 PDHXO00330 501 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 IGF2BP3O00425 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 FLOT1O75955 427 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 CD2BP2O95400 341 aaKnown RBP12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 PDHBP11177 359 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 RABEP1Q15276 862 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 APOA5Q6Q788 366 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 NCOA5Q9HCD5 579 aaKnown RBP12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 VAT1LQ9HCJ6 419 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 MYH6P13533 1939 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 ZBTB43O43298 467 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 BMP3P12645 472 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 IRX3P78415 501 aaPredicted RBP12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 GMCL1P1Q8NEA9 526 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 MKL1Q969V6 931 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
AP004247.2-201ENST00000526131 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 COL11A1P12107 1806 aaPredicted RBP12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 GOLGA8AA7E2F4 631 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 ST18O60284 1047 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 LARGE1O95461 756 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 LIFRP42702 1097 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 SREBF2Q12772 1141 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 MOGSQ13724 837 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 SMCR8Q8TEV9 937 aaPredicted RBP12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 TSKSQ9UJT2 592 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 AGTPBP1Q9UPW5 1226 aa12.94□□□□□ -0.34
AP004247.2-201ENST00000526131 NOVP48745 357 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 GPAT2Q6NUI2 795 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 TMTC2Q8N394 836 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 PROCA1Q8NCQ7 364 aaPredicted RBP12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 LPAR1Q92633 364 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 PARP14Q460N5 1801 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 PLEKHA8P1O95397 391 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 NT5C2P49902 561 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 STAT2P52630 851 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 TROAPQ12815 778 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 TAF1CQ15572 869 aaPredicted RBP12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 SH3D19Q5HYK7 790 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 SGMS1Q86VZ5 419 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 ANKS1AQ92625 1134 aa12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 ASCC2Q9H1I8 757 aaPredicted RBP12.93□□□□□ -0.34
AP004247.2-201ENST00000526131 TRPA1O75762 1119 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 ZNF543Q08ER8 600 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 PLS1Q14651 629 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 RTN1Q16799 776 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 DCAF4Q8WV16 495 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 MAD2L2Q9UI95 211 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 SMCHD1A6NHR9 2005 aa12.92□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 KLRF2D3W0D1 207 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 DDAH1O94760 285 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 TBC1D8O95759 1140 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 PDIA3P30101 505 aaKnown RBP12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 CDC27P30260 824 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 ADD1P35611 737 aaKnown RBP12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 ANKRD1Q15327 319 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 ME3Q16798 604 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 CCDC174Q6PII3 467 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 CATSPERGQ6ZRH7 1159 aa12.91□□□□□ -0.34
AP004247.2-201ENST00000526131 NBPF11Q86T75 865 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms