RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TOMM22Q9NS69 142 aa20.76■□□□□ 0.91
NR1H3-228ENST00000525441 SLC15A5A6NIM6 579 aa20.75■□□□□ 0.91
NR1H3-228ENST00000525441 GJB1P08034 283 aa20.75■□□□□ 0.91
NR1H3-228ENST00000525441 PCP11498 1178 aaKnown RBP20.75■□□□□ 0.91
NR1H3-228ENST00000525441 PLS1Q14651 629 aa20.75■□□□□ 0.91
NR1H3-228ENST00000525441 GMCL1P1Q8NEA9 526 aa20.75■□□□□ 0.91
NR1H3-228ENST00000525441 MOV10L1Q9BXT6 1211 aaKnown RBP20.75■□□□□ 0.91
NR1H3-228ENST00000525441 UNC93B1Q9H1C4 597 aa20.75■□□□□ 0.91
NR1H3-228ENST00000525441 PPP1R9AQ9ULJ8 1098 aa20.75■□□□□ 0.91
NR1H3-228ENST00000525441 FGRP09769 529 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 GSPT1P15170 499 aaKnown RBP20.74■□□□□ 0.91
NR1H3-228ENST00000525441 ZKSCAN1P17029 563 aaPredicted RBP20.74■□□□□ 0.91
NR1H3-228ENST00000525441 PTPREP23469 700 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 MAP2K5Q13163 448 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
NR1H3-228ENST00000525441 USP6NLQ92738 828 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 APBA2Q99767 749 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 SLF1Q9BQI6 1058 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 RNF41Q9H4P4 317 aaPredicted RBP20.74■□□□□ 0.91
NR1H3-228ENST00000525441 FBXO28Q9NVF7 368 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 ADAMTS5Q9UNA0 930 aa20.74■□□□□ 0.91
NR1H3-228ENST00000525441 STRNO43815 780 aa20.73■□□□□ 0.91
NR1H3-228ENST00000525441 CAPN2P17655 700 aa20.73■□□□□ 0.91
NR1H3-228ENST00000525441 NUP88Q99567 741 aaPredicted RBP20.73■□□□□ 0.91
NR1H3-228ENST00000525441 MROH8Q9H579 483 aa20.73■□□□□ 0.91
NR1H3-228ENST00000525441 INCENPQ9NQS7 918 aa20.73■□□□□ 0.91
NR1H3-228ENST00000525441 STX8Q9UNK0 236 aa20.73■□□□□ 0.91
NR1H3-228ENST00000525441 CENPFP49454 3210 aa20.73■□□□□ 0.91
NR1H3-228ENST00000525441 RLFQ13129 1914 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 VWA5AO00534 786 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 SLC25A27O95847 323 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 ERCC3P19447 782 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 GJA8P48165 433 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 HAND2P61296 217 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 GRB14Q14449 540 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 RRP12Q5JTH9 1297 aaKnown RBP20.72■□□□□ 0.91
NR1H3-228ENST00000525441 AKNAD1Q5T1N1 836 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 SLFN13Q68D06 897 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 MFSD6Q6ZSS7 791 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 RUFY2Q8WXA3 655 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 TRIB2Q92519 343 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 DSCC1Q9BVC3 393 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 PDE4DIPQ5VU43 2346 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 A0A0G2JMZ2 1700 aa20.72■□□□□ 0.91
NR1H3-228ENST00000525441 MYH4Q9Y623 1939 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 ZNF213O14771 459 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 COPB2P35606 906 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 TMEM132BQ14DG7 1078 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 NCAPG2Q86XI2 1143 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 PRPF38AQ8NAV1 312 aaKnown RBP20.71■□□□□ 0.91
NR1H3-228ENST00000525441 U2AF1L4Q8WU68 220 aaKnown RBP20.71■□□□□ 0.91
NR1H3-228ENST00000525441 STAG1Q8WVM7 1258 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 CTNNA3Q9UI47 895 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 CTDP1Q9Y5B0 961 aaPredicted RBP20.71■□□□□ 0.91
NR1H3-228ENST00000525441 TACC3Q9Y6A5 838 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 RPTORQ8N122 1335 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 RAD50Q92878 1312 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 PLXNB2O15031 1838 aa20.71■□□□□ 0.91
NR1H3-228ENST00000525441 BMP3P12645 472 aa20.7■□□□□ 0.9
NR1H3-228ENST00000525441 NT5C2P49902 561 aa20.7■□□□□ 0.9
NR1H3-228ENST00000525441 CENPQQ7L2Z9 268 aaPredicted RBP20.7■□□□□ 0.9
NR1H3-228ENST00000525441 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.7■□□□□ 0.9
NR1H3-228ENST00000525441 HMX1Q9NP08 348 aaPredicted RBP20.7■□□□□ 0.9
NR1H3-228ENST00000525441 PAK6Q9NQU5 681 aaPredicted RBP20.7■□□□□ 0.9
NR1H3-228ENST00000525441 IL17RBQ9NRM6 502 aa20.7■□□□□ 0.9
NR1H3-228ENST00000525441 ISY1Q9ULR0 285 aaKnown RBP20.7■□□□□ 0.9
NR1H3-228ENST00000525441 ZBED4O75132 1171 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 SGPL1O95470 568 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 HOXC6P09630 235 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 STAT3P40763 770 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 DPP9Q86TI2 863 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 RIOX2Q8IUF8 465 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 ABRAQ8N0Z2 381 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 GMCL1Q96IK5 515 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 DEFB118Q96PH6 123 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 TCP11L1Q9NUJ3 509 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 SLC5A4Q9NY91 659 aa20.69■□□□□ 0.9
NR1H3-228ENST00000525441 NMT2O60551 498 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 PRKAR2AP13861 404 aaKnown RBP20.68■□□□□ 0.9
NR1H3-228ENST00000525441 ADORA2AP29274 412 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 SLC1A4P43007 532 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
NR1H3-228ENST00000525441 MFSD14CQ5VZR4 134 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 TBC1D10CQ8IV04 446 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 ESR2Q92731 530 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 SHISA4Q96DD7 197 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 PARP14Q460N5 1801 aa20.68■□□□□ 0.9
NR1H3-228ENST00000525441 TFRCP02786 760 aaKnown RBP20.67■□□□□ 0.9
NR1H3-228ENST00000525441 FDX1P10109 184 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 FCER1AP12319 257 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 CHMLP26374 656 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 NOVP48745 357 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 TRIM32Q13049 653 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 CCL14Q16627 93 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 MAP3K21Q5TCX8 1036 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 FAM160B2Q86V87 743 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 REPS2Q8NFH8 660 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 CHURC1Q8WUH1 139 aa20.67■□□□□ 0.9
NR1H3-228ENST00000525441 KIFC2Q96AC6 838 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms