RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 GNAQP50148 359 aa18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 HUNKP57058 714 aa18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 ZNF543Q08ER8 600 aa18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 PPIL2Q13356 520 aa18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 GPATCH4Q5T3I0 446 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 TMTC3Q6ZXV5 915 aa18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 LPAR1Q92633 364 aa18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 INTS4Q96HW7 963 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 LLPHQ9BRT6 129 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 FAM217BQ9NTX9 383 aaPredicted RBP18.43■□□□□ 0.54
TSPAN4-213ENST00000524895 PALM3A6NDB9 673 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 C19orf81C9J6K1 198 aa18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 PLEKHA8P1O95397 391 aa18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 BMP3P12645 472 aa18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 STAG2Q8N3U4 1231 aa18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 NUP88Q99567 741 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
TSPAN4-213ENST00000524895 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 HMGCS2P54868 508 aa18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 KIAA1755Q5JYT7 1200 aa18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 CMTR1Q8N1G2 835 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 NSUN7Q8NE18 718 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
TSPAN4-213ENST00000524895 CXCL11O14625 94 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 IRF6O14896 467 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 WDR46O15213 610 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 JAK2O60674 1132 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 CTDNEP1O95476 244 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 IFNAR1P17181 557 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 IKQ13123 557 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 DGKZQ13574 1117 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 NTRK3Q16288 839 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 FAM83BQ5T0W9 1011 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 TRIM22Q8IYM9 498 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 CCDC82Q8N4S0 544 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 WNK4Q96J92 1243 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 C12orf42Q96LP6 360 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
TSPAN4-213ENST00000524895 TMEM88BA6NKF7 163 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 PPFIA3O75145 1194 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 VCAM1P19320 739 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 HMGN5P82970 282 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 SH3D19Q5HYK7 790 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 SAPCD2Q86UD0 394 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 SRBD1Q8N5C6 995 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 PHKBQ93100 1093 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 SLC26A6Q9BXS9 759 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 ABT1Q9ULW3 272 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 KCNH4Q9UQ05 1017 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 CNTNAP5Q8WYK1 1306 aa18.39■□□□□ 0.53
TSPAN4-213ENST00000524895 LOC285556D6RIA3 1793 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 A0A0G2JLL6 359 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 TMEM232C9JQI7 657 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 DTNBO60941 627 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 GJB2P29033 226 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 GJA5P36382 358 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 AKAP17AQ02040 695 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 SSRP1Q08945 709 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 TTBK2Q6IQ55 1244 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 PRRT2Q7Z6L0 340 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 CPVLQ9H3G5 476 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 TLL2Q9Y6L7 1015 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 STK36Q9NRP7 1315 aa18.38■□□□□ 0.53
TSPAN4-213ENST00000524895 FMNL1O95466 1100 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 ZBTB48P10074 688 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 ZNF157P51786 506 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 STAT2P52630 851 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 FUT2Q10981 343 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 SNAPC2Q13487 334 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 RNF26Q9BY78 433 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 UBA5Q9GZZ9 404 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 RPAP3Q9H6T3 665 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 ORC3Q9UBD5 711 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 KIF3AQ9Y496 699 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 PTPRFP10586 1907 aa18.37■□□□□ 0.53
TSPAN4-213ENST00000524895 SMARCA1P28370 1054 aa18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 SLC16A2P36021 539 aa18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 SPRYD7Q5W111 196 aa18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 RGMBQ6NW40 437 aa18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 FAM160B2Q86V87 743 aa18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 PROCA1Q8NCQ7 364 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
TSPAN4-213ENST00000524895 PRPF3O43395 683 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 DEXIO95424 95 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 GTF2A2P52657 109 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 SYDE2Q5VT97 1194 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 BTNL9Q6UXG8 535 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms