RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 RBL2Q08999 1139 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 SBK1Q52WX2 424 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 EARS2Q5JPH6 523 aaKnown RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 FAM182BQ5T319 152 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 CRNKL1Q9BZJ0 848 aaKnown RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 ARPP21Q9UBL0 812 aaPredicted RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 TTF2Q9UNY4 1162 aaKnown RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 CCDC66A2RUB6 948 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 FAM205CA6NFA0 338 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 POTEB2H3BUK9 544 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 KIF5CO60282 957 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 KIF5BP33176 963 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 LONP1P36776 959 aaKnown RBP9.4□□□□□ -0.9
CHD7-202ENST00000524602 PTGDRQ13258 359 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 PFKFB3Q16875 520 aaPredicted RBP9.4□□□□□ -0.9
CHD7-202ENST00000524602 MYO1AQ9UBC5 1043 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 COL4A1P02462 1669 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 TEX33O43247 280 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 SMIM5Q71RC9 77 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 TMTC1Q8IUR5 882 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 CEP112Q8N8E3 955 aa9.4□□□□□ -0.9
CHD7-202ENST00000524602 CCDC12Q8WUD4 166 aaPredicted RBP9.4□□□□□ -0.9
CHD7-202ENST00000524602 PRDM1O75626 825 aa9.4□□□□□ -0.91
CHD7-202ENST00000524602 MYL1P05976 194 aa9.4□□□□□ -0.91
CHD7-202ENST00000524602 TXLNAP40222 546 aa9.4□□□□□ -0.91
CHD7-202ENST00000524602 ZNF174Q15697 407 aa9.4□□□□□ -0.91
CHD7-202ENST00000524602 PTPN21Q16825 1174 aa9.4□□□□□ -0.91
CHD7-202ENST00000524602 TEX35Q5T0J7 233 aa9.4□□□□□ -0.91
CHD7-202ENST00000524602 NSUN4Q96CB9 384 aaKnown RBP9.4□□□□□ -0.91
CHD7-202ENST00000524602 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.91
CHD7-202ENST00000524602 MINPP1Q9UNW1 487 aa9.4□□□□□ -0.91
CHD7-202ENST00000524602 SPATA31A6Q5VVP1 1343 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 SOWAHDA6NJG2 315 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 ADRA2BP18089 450 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 NLRP5P59047 1200 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 DYNLL1P63167 89 aaKnown RBP9.39□□□□□ -0.91
CHD7-202ENST00000524602 PAK1Q13153 545 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 SLC10A5Q5PT55 438 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 ZNF658Q5TYW1 1059 aaPredicted RBP9.39□□□□□ -0.91
CHD7-202ENST00000524602 KLHL10Q6JEL2 608 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 CC2D1AQ6P1N0 951 aaPredicted RBP9.39□□□□□ -0.91
CHD7-202ENST00000524602 SRBD1Q8N5C6 995 aaKnown RBP9.39□□□□□ -0.91
CHD7-202ENST00000524602 UBXN6Q9BZV1 441 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 MRPL44Q9H9J2 332 aaKnown RBP9.39□□□□□ -0.91
CHD7-202ENST00000524602 NHSQ6T4R5 1651 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 XDHP47989 1333 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 USP17L21D6R901 530 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 PLA2G4AP47712 749 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 BRD3Q15059 726 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 SRGAP1Q7Z6B7 1085 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 ARFGAP3Q9NP61 516 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 CTNND2Q9UQB3 1225 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 EP400Q96L91 3159 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 TAF1P21675 1872 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 CCDC151A5D8V7 595 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 GALNT17Q6IS24 598 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 RAD9BQ6WBX8 426 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 DESI2Q9BSY9 194 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 ANKRD2Q9GZV1 360 aa9.39□□□□□ -0.91
CHD7-202ENST00000524602 DCP1AQ9NPI6 582 aaPredicted RBP9.39□□□□□ -0.91
CHD7-202ENST00000524602 GYPCP04921 128 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 KRT31Q15323 416 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 ERFEQ4G0M1 354 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 CYP26C1Q6V0L0 522 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 ZNF384Q8TF68 577 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 CDC23Q9UJX2 597 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 COL24A1Q17RW2 1714 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 H7C1D1 291 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 WNT7AO00755 349 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 TUBBP07437 444 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 CASP14P31944 242 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 GNAQP50148 359 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 STX17P56962 302 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 MECOMQ03112 1051 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 KARSQ15046 597 aaKnown RBP9.38□□□□□ -0.91
CHD7-202ENST00000524602 RRAGBQ5VZM2 374 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 PIK3AP1Q6ZUJ8 805 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 MSL3Q8N5Y2 521 aaKnown RBP9.38□□□□□ -0.91
CHD7-202ENST00000524602 HNRNPLLQ8WVV9 542 aaKnown RBP9.38□□□□□ -0.91
CHD7-202ENST00000524602 ANKS1AQ92625 1134 aa9.38□□□□□ -0.91
CHD7-202ENST00000524602 CYP2D7A0A087X1C5 515 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 CTAGE9A4FU28 777 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 LAD1O00515 517 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 N4BP3O15049 544 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 TBC1D8O95759 1140 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 CHMP4BP1P59074 171 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 KCNB1Q14721 858 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 MTF1Q14872 753 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 TCP11X2Q5H9J9 407 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 SPTY2D1Q68D10 685 aaPredicted RBP9.37□□□□□ -0.91
CHD7-202ENST00000524602 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 NYXQ9GZU5 481 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 ABHD10Q9NUJ1 306 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 CNTNAP4Q9C0A0 1308 aa9.37□□□□□ -0.91
CHD7-202ENST00000524602 SBF2Q86WG5 1849 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms