RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PPP1R9AQ9ULJ8 1098 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 A0A0G2JMZ2 1700 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 E7EWF7 191 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 FLOT1O75955 427 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 ECM2O94769 699 aaPredicted RBP14.11□□□□□ -0.15
CLN8-207ENST00000524258 SNHG28P0DPA3 235 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 TOP1P11387 765 aaKnown RBP14.11□□□□□ -0.15
CLN8-207ENST00000524258 KIF22Q14807 665 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 SEC23AQ15436 765 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 SLFN13Q68D06 897 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 USP6NLQ92738 828 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 ZKSCAN3Q9BRR0 538 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 PARP14Q460N5 1801 aa14.11□□□□□ -0.15
CLN8-207ENST00000524258 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 VWA5AO00534 786 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 SLC27A2O14975 620 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 PLA2G6O60733 806 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 FMNL1O95466 1100 aaPredicted RBP14.1□□□□□ -0.15
CLN8-207ENST00000524258 MCCP23508 829 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 PRMT2P55345 433 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 FCGRTP55899 365 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 ANTXR2P58335 489 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 PRKCZQ05513 592 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 TMEM132BQ14DG7 1078 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 MB21D2Q8IYB1 491 aaPredicted RBP14.1□□□□□ -0.15
CLN8-207ENST00000524258 ENAHQ8N8S7 591 aaPredicted RBP14.1□□□□□ -0.15
CLN8-207ENST00000524258 KCNB2Q92953 911 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 PAGR1Q9BTK6 254 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 KRT23Q9C075 422 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 CNNM2Q9H8M5 875 aa14.1□□□□□ -0.15
CLN8-207ENST00000524258 ZNF214Q9UL59 606 aaPredicted RBP14.1□□□□□ -0.15
CLN8-207ENST00000524258 BMP3P12645 472 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 IRF5Q13568 498 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 ARHGEF6Q15052 776 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 MORN1Q5T089 497 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 CREB3L3Q68CJ9 461 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 KIAA1211Q6ZU35 1233 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 MB21D1Q8N884 522 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 ARMC5Q96C12 935 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 ZSCAN10Q96SZ4 725 aaPredicted RBP14.09□□□□□ -0.15
CLN8-207ENST00000524258 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
CLN8-207ENST00000524258 SPATC1LQ9H0A9 340 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 ANO2Q9NQ90 1003 aa14.09□□□□□ -0.15
CLN8-207ENST00000524258 TNPO2O14787 897 aaKnown RBP14.08□□□□□ -0.16
CLN8-207ENST00000524258 IGHA2P01877 340 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 PDHBP11177 359 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 MAPK4P31152 587 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 FLT3LGP49771 235 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 TSGA10IPQ3SY00 556 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 BTNL9Q6UXG8 535 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 GPR142Q7Z601 462 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 RASEFQ8IZ41 740 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.16
CLN8-207ENST00000524258 SLF1Q9BQI6 1058 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 SENP2Q9HC62 589 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 FEM1BQ9UK73 627 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 PLXNB2O15031 1838 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 MGAMO43451 1857 aa14.08□□□□□ -0.16
CLN8-207ENST00000524258 TMEM232C9JQI7 657 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 ATP2A1O14983 1001 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 HOXD10P28358 340 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 SLC1A4P43007 532 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 CCDC178Q5BJE1 867 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 TTBK2Q6IQ55 1244 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 KCTD1Q719H9 257 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 SHCBP1Q8NEM2 672 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 DCAF4Q8WV16 495 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 SLC38A10Q9HBR0 1119 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 TNKSO95271 1327 aa14.07□□□□□ -0.16
CLN8-207ENST00000524258 RAD21O60216 631 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 PTPREP23469 700 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 ZNF543Q08ER8 600 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 IFFO2Q5TF58 517 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 PLEKHH3Q7Z736 793 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 IQCA1Q86XH1 822 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 RIOX2Q8IUF8 465 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 NCOA7Q8NI08 942 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 COA7Q96BR5 231 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 ZNF333Q96JL9 665 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 RIPK3Q9Y572 518 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 ZNF536O15090 1300 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 BRCA2P51587 3418 aa14.06□□□□□ -0.16
CLN8-207ENST00000524258 ERCC3P19447 782 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 STAT3P40763 770 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 CCNA1P78396 465 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 GRB14Q14449 540 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 CASC1Q6TDU7 716 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLN8-207ENST00000524258 FAM160B2Q86V87 743 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 PNMA1Q8ND90 353 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 SH3TC2Q8TF17 1288 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 KIFC2Q96AC6 838 aa14.05□□□□□ -0.16
CLN8-207ENST00000524258 GPHNQ9NQX3 736 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms