RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 PPP4R4Q6NUP7 873 aa11.42□□□□□ -0.58
PFDN1-207ENST00000524074 KCT2Q8NC54 265 aa11.42□□□□□ -0.58
PFDN1-207ENST00000524074 RNF214Q8ND24 703 aa11.42□□□□□ -0.58
PFDN1-207ENST00000524074 CCDC8Q9H0W5 538 aaPredicted RBP11.42□□□□□ -0.58
PFDN1-207ENST00000524074 CDH19Q9H159 772 aa11.42□□□□□ -0.58
PFDN1-207ENST00000524074 GGA1Q9UJY5 639 aa11.42□□□□□ -0.58
PFDN1-207ENST00000524074 ZNF451Q9Y4E5 1061 aa11.42□□□□□ -0.58
PFDN1-207ENST00000524074 COMMD10Q9Y6G5 202 aa11.42□□□□□ -0.58
PFDN1-207ENST00000524074 TMPRSS2O15393 492 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 CAPNS1P04632 268 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 APPP05067 770 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 SEPT7Q16181 437 aaKnown RBP11.41□□□□□ -0.58
PFDN1-207ENST00000524074 C20orf204Q6ZNR8 217 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 UBE2R2Q712K3 238 aaPredicted RBP11.41□□□□□ -0.58
PFDN1-207ENST00000524074 TRIM59Q8IWR1 403 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 BTN2A2Q8WVV5 523 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 MRGPRX3Q96LB0 322 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 YIPF4Q9BSR8 244 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 IFT22Q9H7X7 185 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 STARD13Q9Y3M8 1113 aa11.41□□□□□ -0.58
PFDN1-207ENST00000524074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.4□□□□□ -0.58
PFDN1-207ENST00000524074 ALBP02768 609 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 ITGA4P13612 1032 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 CD247P20963 164 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 NTF4P34130 210 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 NKG7Q16617 165 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 CFAP100Q494V2 611 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 MAP4K3Q8IVH8 894 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 ADCY4Q8NFM4 1077 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 OR2W6PQ8NHA6 318 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 TTC8Q8TAM2 541 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 KCTD13Q8WZ19 329 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 PTPRN2Q92932 1015 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 MAGEB10Q96LZ2 347 aaPredicted RBP11.4□□□□□ -0.58
PFDN1-207ENST00000524074 MTFR1LQ9H019 292 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 ARNT2Q9HBZ2 717 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 EMC9Q9Y3B6 208 aa11.4□□□□□ -0.58
PFDN1-207ENST00000524074 NRG2O14511 850 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-207ENST00000524074 CREB3O43889 395 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 DLX3O60479 287 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 DLGAP3O95886 979 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 BRD3Q15059 726 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 PRAMEF13Q5VWM6 474 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 PI4K2BQ8TCG2 481 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 NANOS1Q8WY41 292 aaKnown RBP11.39□□□□□ -0.59
PFDN1-207ENST00000524074 RCC1LQ96I51 464 aaKnown RBP11.39□□□□□ -0.59
PFDN1-207ENST00000524074 TRIM47Q96LD4 638 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 ATXN3LQ9H3M9 355 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.39□□□□□ -0.59
PFDN1-207ENST00000524074 CRIM1Q9NZV1 1036 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 TRHDEQ9UKU6 1024 aa11.39□□□□□ -0.59
PFDN1-207ENST00000524074 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-207ENST00000524074 BLACEA4D250 179 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 B4E1Z4 1266 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 DDX3YO15523 660 aaKnown RBP11.38□□□□□ -0.59
PFDN1-207ENST00000524074 SETDB1Q15047 1291 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 C7orf61Q8IZ16 206 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 CNTD1Q8N815 330 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 GALNT11Q8NCW6 608 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 MPHOSPH6Q99547 160 aaKnown RBP11.38□□□□□ -0.59
PFDN1-207ENST00000524074 LRRC4BQ9NT99 713 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 PPP1R9AQ9ULJ8 1098 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 APOBEC2Q9Y235 224 aaKnown RBP11.38□□□□□ -0.59
PFDN1-207ENST00000524074 SPEF1Q9Y4P9 236 aa11.38□□□□□ -0.59
PFDN1-207ENST00000524074 GOLGA6CA6NDK9 693 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 GOLGA6BA6NDN3 693 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 ZEB2O60315 1214 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 ADAM11O75078 769 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 KCNH1O95259 989 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 CST3P01034 146 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-207ENST00000524074 GOLGA6DP0CG33 693 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 CD68P34810 354 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-207ENST00000524074 RNF4P78317 190 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 SLBPQ14493 270 aaKnown RBP eCLIP11.37□□□□□ -0.59
PFDN1-207ENST00000524074 EXOSC6Q5RKV6 272 aaKnown RBP11.37□□□□□ -0.59
PFDN1-207ENST00000524074 TSHZ1Q6ZSZ6 1077 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 MAMDC2Q7Z304 686 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-207ENST00000524074 GOLGA6L1Q8N7Z2 621 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 SCLYQ96I15 445 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 FANCD2OSQ96PS1 177 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 GP6Q9HCN6 339 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 GOLGA6AQ9NYA3 693 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 ZNF180Q9UJW8 692 aa11.37□□□□□ -0.59
PFDN1-207ENST00000524074 NEMP1O14524 444 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 GFRA3O60609 400 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 RGS20O76081 388 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 PYGMP11217 842 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 CAP2P40123 477 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 KCNJ6P48051 423 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 MAP4K2Q12851 820 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 AUHQ13825 339 aaKnown RBP11.36□□□□□ -0.59
PFDN1-207ENST00000524074 MLC1Q15049 377 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 SYDE2Q5VT97 1194 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 CDCA2Q69YH5 1023 aaPredicted RBP11.36□□□□□ -0.59
PFDN1-207ENST00000524074 SLC4A10Q6U841 1118 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 SLCO4C1Q6ZQN7 724 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 TCEAL8Q8IYN2 117 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms