RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	LDHAL6A	Q6ZMR3	332 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCDC129	Q6ZRS4	1044 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	KBTBD3	Q8NAB2	608 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	RGS22	Q8NE09	1264 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	C16orf45	Q96MC5	204 aa	Predicted RBP	9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	USP28	Q96RU2	1077 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZIC5	Q96T25	663 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	ARID3A	Q99856	593 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	BPIFA3	Q9BQP9	254 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	HELLS	Q9NRZ9	838 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	SCAF8	Q9UPN6	1271 aa	Known RBP	9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	MORC2	Q9Y6X9	1032 aa	Predicted RBP	9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	MYO3B	Q8WXR4	1341 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	PITPNM2	Q9BZ72	1349 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033		A0A1W2PQ27	194 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033		A0A1W2PQ64	194 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033		A0A1W2PQD8	194 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	SOWAHB	A6NEL2	793 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	USP27X	A6NNY8	438 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	WNT10B	O00744	389 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	FKBP1B	P68106	108 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	KIF23	Q02241	960 aa	Predicted RBP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	FAM160A1	Q05DH4	1040 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	PRAMEF18	Q5VWM3	479 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	POTEG	Q6S5H5	508 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	DHX32	Q7L7V1	743 aa	Known RBP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	NBPF11	Q86T75	865 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	KIAA0825	Q8IV33	1275 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCAR1	Q8IX12	1150 aa	Known RBP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	FMR1NB	Q8N0W7	255 aa	Predicted RBP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCDC112	Q8NEF3	446 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZNF397	Q8NF99	534 aa	Predicted RBP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	KLHDC4	Q8TBB5	520 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	ABHD8	Q96I13	439 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZNF396	Q96N95	335 aa	Predicted RBP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	DBNDD2	Q9BQY9	259 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	SIL1	Q9H173	461 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	CD209	Q9NNX6	404 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	ANO10	Q9NW15	660 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	TSR3	Q9UJK0	312 aa	Known RBP	9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	HDAC9	Q9UKV0	1011 aa		9.04	□□□□□ -0.96
SPIDR-223	ENST00000524033	DOCK2	Q92608	1830 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	POTEM	A6NI47	508 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCDC69	A6NI79	296 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	KIF2A	O00139	706 aa	Predicted RBP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	TRPA1	O75762	1119 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	CHGB	P05060	677 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	GSDMD	P57764	484 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	GUCA2A	Q02747	115 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	ARID5B	Q14865	1188 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	CEP135	Q66GS9	1140 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCDC73	Q6ZRK6	1079 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	C15orf52	Q6ZUT6	534 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	CDAN1	Q8IWY9	1227 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCAR2	Q8N163	923 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	KCTD12	Q96CX2	325 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZNF274	Q96GC6	653 aa	Predicted RBP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	ERO1A	Q96HE7	468 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZNF594	Q96JF6	807 aa	Predicted RBP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	SEC62	Q99442	399 aa	Known RBP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	FTO	Q9C0B1	505 aa	Known RBP eCLIP	9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	CNNM1	Q9NRU3	951 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	RTEL1	Q9NZ71	1219 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	IMPACT	Q9P2X3	320 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	MAST3	O60307	1309 aa		9.03	□□□□□ -0.96
SPIDR-223	ENST00000524033	LRRC37A	A6NMS7	1700 aa		9.02	□□□□□ -0.96
SPIDR-223	ENST00000524033	LAMB2	P55268	1798 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	CCDC85C	A6NKD9	419 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	GOLGA6L19	H0YKK7	550 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	UBE2Q2L	H0YL09	131 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033		H3BQV1	296 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	YEATS4	O95619	227 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	NF2	P35240	595 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	GJA5	P36382	358 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	RFC5	P40937	340 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	DLGAP5	Q15398	846 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	TPD52L1	Q16890	204 aa	Predicted RBP	9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	MOB2	Q70IA6	237 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	ATG9A	Q7Z3C6	839 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	ZNF804A	Q7Z570	1209 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	DRC7	Q8IY82	874 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	CEP57L1	Q8IYX8	460 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	FSIP1	Q8NA03	581 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	KIF18A	Q8NI77	898 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	CHMP4C	Q96CF2	233 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	DDX11	Q96FC9	970 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	CSRNP1	Q96S65	589 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	L2HGDH	Q9H9P8	463 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	RNF186	Q9NXI6	227 aa		9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	ZHX1	Q9UKY1	873 aa	Predicted RBP	9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	MYO5A	Q9Y4I1	1855 aa	Known RBP	9.02	□□□□□ -0.97
SPIDR-223	ENST00000524033	MYH3	P11055	1940 aa		9.01	□□□□□ -0.97
SPIDR-223	ENST00000524033		E7EWF7	191 aa		9.01	□□□□□ -0.97
SPIDR-223	ENST00000524033	FOXP2	O15409	715 aa		9.01	□□□□□ -0.97
SPIDR-223	ENST00000524033	AP1G2	O75843	785 aa		9.01	□□□□□ -0.97
SPIDR-223	ENST00000524033	FDPS	P14324	419 aa	Known RBP	9.01	□□□□□ -0.97
SPIDR-223	ENST00000524033	IL1R1	P14778	569 aa		9.01	□□□□□ -0.97
SPIDR-223	ENST00000524033	TAF1	P21675	1872 aa		9.01	□□□□□ -0.97

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