RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 TMTC3Q6ZXV5 915 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 VPS54Q9P1Q0 977 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 NYAP2Q9P242 653 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 MAD2L2Q9UI95 211 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 KCNJ14Q9UNX9 436 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 MYH8P13535 1937 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 FOCADQ5VW36 1801 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 IGKV6D-41A0A0C4DH26 115 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 FDPSP14324 419 aaKnown RBP10.83□□□□□ -0.68
SDCBP-212ENST00000523483 PDCP20941 246 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 NBR1Q14596 966 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 LDHDQ86WU2 507 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 KIFC2Q96AC6 838 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 LLPHQ9BRT6 129 aaKnown RBP10.83□□□□□ -0.68
SDCBP-212ENST00000523483 GOPCQ9HD26 462 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 SEC63Q9UGP8 760 aaKnown RBP10.83□□□□□ -0.68
SDCBP-212ENST00000523483 IFNAR1P17181 557 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 PPP4R3BQ5MIZ7 849 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 NUCB2P80303 420 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 GRM4Q14833 912 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 NTRK3Q16288 839 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
SDCBP-212ENST00000523483 ARMC9Q7Z3E5 817 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 SH2D4AQ9H788 454 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 USP17L10C9JJH3 530 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 BMP3P12645 472 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 PTPRAP18433 802 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 ATP2B1P20020 1258 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 CEBPZQ03701 1054 aaKnown RBP10.82□□□□□ -0.68
SDCBP-212ENST00000523483 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
SDCBP-212ENST00000523483 PIGSQ96S52 555 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
SDCBP-212ENST00000523483 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-212ENST00000523483 PLIN4Q96Q06 1357 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 NT5C2P49902 561 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 GNAQP50148 359 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 KIAA1755Q5JYT7 1200 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 ZNF543Q08ER8 600 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 USH1GQ495M9 461 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 ZNF280CQ8ND82 737 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
SDCBP-212ENST00000523483 SMARCC2Q8TAQ2 1214 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 ANKS1AQ92625 1134 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 TMX2Q9Y320 296 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
SDCBP-212ENST00000523483 CYTH3O43739 400 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 DEXIO95424 95 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-212ENST00000523483 TAL1P17542 331 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-212ENST00000523483 ASPRV1Q53RT3 343 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 ANKRD13AQ8IZ07 590 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 TNPO1Q92973 898 aaKnown RBP10.81□□□□□ -0.68
SDCBP-212ENST00000523483 RRP36Q96EU6 259 aaKnown RBP10.81□□□□□ -0.68
SDCBP-212ENST00000523483 AS3MTQ9HBK9 375 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 SIPA1L1O43166 1804 aa10.81□□□□□ -0.68
SDCBP-212ENST00000523483 FLOT1O75955 427 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 CCDC174Q6PII3 467 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 GADL1Q6ZQY3 521 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 CPXCR1Q8N123 301 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 VCPKMTQ9H867 229 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 CTDP1Q9Y5B0 961 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-212ENST00000523483 SSC5DA1L4H1 1573 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 CNTNAP5Q8WYK1 1306 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 PALM3A6NDB9 673 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-212ENST00000523483 XBP1P17861 261 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 GPATCH4Q5T3I0 446 aaKnown RBP10.8□□□□□ -0.68
SDCBP-212ENST00000523483 SLC10A4Q96EP9 437 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 GDPD2Q9HCC8 539 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-212ENST00000523483 ZSCAN22P10073 491 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-212ENST00000523483 YY1P25490 414 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 STAT2P52630 851 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 NLRP5P59047 1200 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 MAP3K10Q02779 954 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 KRT40Q6A162 431 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 ADGRF4Q8IZF3 695 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 C2orf69Q8N8R5 385 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 WASF1Q92558 559 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 COA7Q96BR5 231 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 RNF26Q9BY78 433 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-212ENST00000523483 GBA2Q9HCG7 927 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-212ENST00000523483 TMOD4Q9NZQ9 345 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 MTMR6Q9Y217 621 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 SNCAIPQ9Y6H5 919 aa10.8□□□□□ -0.68
SDCBP-212ENST00000523483 IRF6O14896 467 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 NAPAP54920 295 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 SAFBQ15424 915 aaKnown RBP eCLIP10.79□□□□□ -0.68
SDCBP-212ENST00000523483 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 CIZ1Q9ULV3 898 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-212ENST00000523483 SCG2P13521 617 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 RCAN1P53805 252 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 BACE1P56817 501 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 HUNKP57058 714 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 MKL1Q969V6 931 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 OPTNQ96CV9 577 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 ZDHHC9Q9Y397 364 aa10.79□□□□□ -0.68
SDCBP-212ENST00000523483 SLC35G1Q2M3R5 365 aa10.78□□□□□ -0.68
SDCBP-212ENST00000523483 RPAP3Q9H6T3 665 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms