RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 TSPYL1Q9H0U9 437 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 FOXP1Q9H334 677 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CETN3O15182 167 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 POLR3GO15318 223 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 VPS72Q15906 364 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 ZNF34Q8IZ26 560 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 POLR3EQ9NVU0 708 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 PCDHA12Q9UN75 941 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 A0A1W2PQ27 194 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 A0A1W2PQ64 194 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 A0A1W2PQD8 194 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CAMTA2O94983 1202 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CC2D2BQ6DHV5 1058 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 FAM84BQ96KN1 310 aaPredicted RBP14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CTAGE15A4D2H0 777 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 SLU7O95391 586 aaKnown RBP14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CTAGE8P0CG41 777 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 ADRA2BP18089 450 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CTAGE6Q86UF2 777 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CTAGE4Q8IX94 777 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CSRNP2Q9H175 543 aa14.63□□□□□ -0.07
PCDHGB1-201ENST00000523390 CTAGE9A4FU28 777 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 C21orf2O43822 256 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 KRT9P35527 623 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 SETQ01105 290 aaPredicted RBP14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 NAA15Q9BXJ9 866 aaKnown RBP14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 COA1Q9GZY4 146 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 MEGF6O75095 1541 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 PLEKHA8P1O95397 391 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 MMP1P03956 469 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 TPH2Q8IWU9 490 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 EEF2KMTQ96G04 330 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 MASTLQ96GX5 879 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 PIGSQ96S52 555 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 BRIP1Q9BX63 1249 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 GSTTP1A0A1W2PQM5 241 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 HSPA1LP34931 641 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 CDK8P49336 464 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 HOOK2Q96ED9 719 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 PLA2G12BQ9BX93 195 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 SRRTQ9BXP5 876 aaKnown RBP14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 IL25Q9H293 177 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 CWC15Q9P013 229 aaKnown RBP14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 RICTORQ6R327 1708 aa14.62□□□□□ -0.07
PCDHGB1-201ENST00000523390 H0YHG0 523 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 TTLL1O95922 423 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 CDC25AP30304 524 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 IFI16Q16666 785 aaKnown RBP14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 LINC00116Q8NCU8 138 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 CAPZA3Q96KX2 299 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 EPB41P11171 864 aaKnown RBP14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 STOX1Q6ZVD7 989 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 IMPG2Q9BZV3 1241 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 GAS7O60861 476 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 RFX5P48382 616 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 NKX1-1Q15270 411 aaPredicted RBP14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 CCDC122Q5T0U0 273 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 COA7Q96BR5 231 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 FRMD4BQ9Y2L6 1034 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 GSG1L2A8MUP6 293 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 MCM3P25205 808 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 SEPT7Q16181 437 aaKnown RBP14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 GPATCH4Q5T3I0 446 aaKnown RBP14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 GALNT17Q6IS24 598 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 RGS22Q8NE09 1264 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 FANCLQ9NW38 375 aa14.61□□□□□ -0.07
PCDHGB1-201ENST00000523390 MST1RQ04912 1400 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 CSF1RP07333 972 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 CTNNA2P26232 953 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 MB21D2Q8IYB1 491 aaPredicted RBP14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 MYCT1Q8N699 235 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 STAG1Q8WVM7 1258 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 KAZALD1Q96I82 304 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 CCDC113Q9H0I3 377 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 DCP1AQ9NPI6 582 aaPredicted RBP14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 SWAP70Q9UH65 585 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 LRMPQ12912 555 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 ZBTB9Q96C00 473 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 ERICH4A6NGS2 130 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 RBM6P78332 1123 aaKnown RBP14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 ASPRV1Q53RT3 343 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 CCDC93Q567U6 631 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 CPVLQ9H3G5 476 aa14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 USP42Q9H9J4 1324 aaKnown RBP14.6□□□□□ -0.07
PCDHGB1-201ENST00000523390 NMT2O60551 498 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 LONRF3Q496Y0 759 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 PCDHB6Q9Y5E3 794 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 PXDNLA1KZ92 1463 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 GCNT3O95395 438 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 GRAMD1CQ8IYS0 662 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 CERKQ8TCT0 537 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 AMNQ9BXJ7 453 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 NT5C3AQ9H0P0 336 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 KANSL2Q9H9L4 492 aa14.59□□□□□ -0.07
PCDHGB1-201ENST00000523390 DDX25Q9UHL0 483 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms