RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 CTSKP43235 329 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 CYP4F3Q08477 520 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 SQSTM1Q13501 440 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 NFE2L2Q16236 605 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 BBS9Q3SYG4 887 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 CYP27C1Q4G0S4 372 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 HEATR6Q6AI08 1181 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 LRP10Q7Z4F1 713 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 NOP9Q86U38 636 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 MFSD4AQ8N468 514 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 OSBPL1AQ9BXW6 950 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 LEMD3Q9Y2U8 911 aa6.92□□□□□ -1.3
CTNNA1-238ENST00000523298 A0A1W2PQU0 124 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 ANKRD34BA5PLL1 514 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 MED26O95402 600 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 PRAMEF1O95521 474 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 ITGAVP06756 1048 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 RNF4P78317 190 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 MTERF2Q49AM1 385 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 CDKAL1Q5VV42 579 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 YOD1Q5VVQ6 348 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 EEPD1Q7L9B9 569 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 JMYQ8N9B5 988 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 ST13P5Q8NFI4 369 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 GIMAP7Q8NHV1 300 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 SMARCC1Q92922 1105 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 MRFAP1L1Q96HT8 127 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 MCMBPQ9BTE3 642 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 SEMA6BQ9H3T3 888 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 SEMA3GQ9NS98 782 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 GTF2IRD1Q9UHL9 959 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 FBXL21Q9UKT6 434 aa6.91□□□□□ -1.3
CTNNA1-238ENST00000523298 MEIS1O00470 390 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 FAM153BP0C7A2 387 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 DUSP27Q5VZP5 1158 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 ZNF227Q86WZ6 799 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 WFDC3Q8IUB2 231 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 SH3TC2Q8TF17 1288 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 MRGPRX3Q96LB0 322 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 HSPA12BQ96MM6 686 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 HDAC8Q9BY41 377 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 ARHGEF4Q9NR80 690 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 ATG3Q9NT62 314 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 PCDHB12Q9Y5F1 795 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 KDM2BQ8NHM5 1336 aa6.9□□□□□ -1.3
CTNNA1-238ENST00000523298 TLDC2A0PJX2 215 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 H0Y8X5 98 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 H3BS24 57 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 CEACAM5P06731 702 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 CYP7A1P22680 504 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 CD96P40200 585 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 KIR3DL1P43629 444 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 CYP27A1Q02318 531 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 SSRP1Q08945 709 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 NMIQ13287 307 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 SF1Q15637 639 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 SV2CQ496J9 727 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 NOL6Q9H6R4 1146 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 PIM2Q9P1W9 311 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 CGGBP1Q9UFW8 167 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 CADPSQ9ULU8 1353 aa6.89□□□□□ -1.31
CTNNA1-238ENST00000523298 CYP26A1O43174 497 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 FOSL1P15407 271 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 PPP2R5DQ14738 602 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 TCEAL1Q15170 157 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 MSMPQ1L6U9 139 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 GAB4Q2WGN9 574 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 CRTC3Q6UUV7 619 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 NFXL1Q6ZNB6 911 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 ADAT2Q7Z6V5 191 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 ARHGEF39Q8N4T4 335 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 FIBCD1Q8N539 461 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 LRRN4CLQ8ND94 238 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 APBA2Q99767 749 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 METTL22Q9BUU2 404 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 SPATA9Q9BWV2 254 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 WHRNQ9P202 907 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 EMC9Q9Y3B6 208 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 FHOD1Q9Y613 1164 aa6.88□□□□□ -1.31
CTNNA1-238ENST00000523298 ESYT3A0FGR9 886 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 GNAT3A8MTJ3 354 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 GSC2O15499 205 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 VAMP4O75379 141 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 PPP2R2AP63151 447 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 PIWIL2Q8TC59 973 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 BTN2A2Q8WVV5 523 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 COX4I2Q96KJ9 171 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 ZDHHC15Q96MV8 337 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 CHST7Q9NS84 486 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 PTCH2Q9Y6C5 1203 aa6.87□□□□□ -1.31
CTNNA1-238ENST00000523298 PITPNM2Q9BZ72 1349 aa6.86□□□□□ -1.31
CTNNA1-238ENST00000523298 FAM155AB1AL88 458 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-238ENST00000523298 IGHA1P01876 353 aa6.86□□□□□ -1.31
CTNNA1-238ENST00000523298 ITGA4P13612 1032 aa6.86□□□□□ -1.31
CTNNA1-238ENST00000523298 CHMP4BP1P59074 171 aa6.86□□□□□ -1.31
CTNNA1-238ENST00000523298 IFRD2Q12894 506 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms