RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 POLLQ9UGP5 575 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 EN2P19622 333 aaPredicted RBP8.36□□□□□ -1.07
VPS13B-211ENST00000522802 MZF1P28698 734 aaPredicted RBP8.36□□□□□ -1.07
VPS13B-211ENST00000522802 FKBP1BP68106 108 aa8.36□□□□□ -1.07
VPS13B-211ENST00000522802 GPSM2P81274 684 aa8.36□□□□□ -1.07
VPS13B-211ENST00000522802 CCINQ13939 588 aa8.36□□□□□ -1.07
VPS13B-211ENST00000522802 PRAMEF18Q5VWM3 479 aa8.36□□□□□ -1.07
VPS13B-211ENST00000522802 OTOP1Q7RTM1 612 aa8.36□□□□□ -1.07
VPS13B-211ENST00000522802 THUMPD2Q9BTF0 503 aaKnown RBP8.36□□□□□ -1.07
VPS13B-211ENST00000522802 TRIM17Q9Y577 477 aa8.36□□□□□ -1.07
VPS13B-211ENST00000522802 ZSWIM8A7E2V4 1837 aa8.36□□□□□ -1.07
VPS13B-211ENST00000522802 PDGFAP04085 211 aa8.35□□□□□ -1.07
VPS13B-211ENST00000522802 TM4SF4P48230 202 aa8.35□□□□□ -1.07
VPS13B-211ENST00000522802 CAP1Q01518 475 aa8.35□□□□□ -1.07
VPS13B-211ENST00000522802 DNM1Q05193 864 aaKnown RBP8.35□□□□□ -1.07
VPS13B-211ENST00000522802 PROSER3Q2NL68 480 aa8.35□□□□□ -1.07
VPS13B-211ENST00000522802 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
VPS13B-211ENST00000522802 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
VPS13B-211ENST00000522802 EDEM1Q92611 657 aa8.35□□□□□ -1.07
VPS13B-211ENST00000522802 CELF1Q92879 486 aaKnown RBP8.35□□□□□ -1.07
VPS13B-211ENST00000522802 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
VPS13B-211ENST00000522802 SPEF2Q9C093 1822 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 OTOFQ9HC10 1997 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 H0YGN5 161 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 RNF225M0QZC1 329 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-211ENST00000522802 XYLBO75191 536 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 ANXA1P04083 346 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 VIL1P09327 827 aaKnown RBP8.34□□□□□ -1.07
VPS13B-211ENST00000522802 ARAFP10398 606 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-211ENST00000522802 EIF4A1P60842 406 aaKnown RBP8.34□□□□□ -1.07
VPS13B-211ENST00000522802 AAMPQ13685 434 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 TAF7Q15545 349 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-211ENST00000522802 TRIP4Q15650 581 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-211ENST00000522802 ZNF385CQ66K41 422 aaPredicted RBP8.34□□□□□ -1.07
VPS13B-211ENST00000522802 NLRP10Q86W26 655 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 KLF15Q9UIH9 416 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 POLIQ9UNA4 740 aa8.34□□□□□ -1.07
VPS13B-211ENST00000522802 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
VPS13B-211ENST00000522802 PITPNM2Q9BZ72 1349 aa8.33□□□□□ -1.08
VPS13B-211ENST00000522802 SSC5DA1L4H1 1573 aa8.33□□□□□ -1.08
VPS13B-211ENST00000522802 RPLP1P05386 114 aaKnown RBP8.33□□□□□ -1.08
VPS13B-211ENST00000522802 SREBF2Q12772 1141 aa8.33□□□□□ -1.08
VPS13B-211ENST00000522802 TBC1D16Q8TBP0 767 aa8.33□□□□□ -1.08
VPS13B-211ENST00000522802 ARMC5Q96C12 935 aa8.33□□□□□ -1.08
VPS13B-211ENST00000522802 MYOZ2Q9NPC6 264 aa8.33□□□□□ -1.08
VPS13B-211ENST00000522802 FNDC3AQ9Y2H6 1198 aaKnown RBP8.33□□□□□ -1.08
VPS13B-211ENST00000522802 IGF2BP3O00425 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 SASH3O75995 380 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 U2AF1L5P0DN76 240 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 TARSP26639 723 aaKnown RBP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 U2AF1Q01081 240 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 SYT9Q86SS6 491 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 SLC17A8Q8NDX2 589 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 CD99L2Q8TCZ2 262 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 ACDQ96AP0 544 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 GMLQ99445 158 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 OXCT2Q9BYC2 517 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 BIN2Q9UBW5 565 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 TRMT112Q9UI30 125 aaKnown RBP8.32□□□□□ -1.08
VPS13B-211ENST00000522802 FZD1Q9UP38 647 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 PTPN22Q9Y2R2 807 aa8.32□□□□□ -1.08
VPS13B-211ENST00000522802 HTATSF1O43719 755 aaKnown RBP8.31□□□□□ -1.08
VPS13B-211ENST00000522802 SIN3BO75182 1162 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 PCSK2P16519 638 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 USP5P45974 858 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
VPS13B-211ENST00000522802 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
VPS13B-211ENST00000522802 PRKG1Q13976 671 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 NBPF9Q3BBW0 867 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 SND1Q7KZF4 910 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS13B-211ENST00000522802 RAB44Q7Z6P3 723 aaPredicted RBP8.31□□□□□ -1.08
VPS13B-211ENST00000522802 GJD3Q8N144 294 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 SVOPQ8N4V2 548 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 WHAMMQ8TF30 809 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 BHMTQ93088 406 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 EYA3Q99504 573 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 GDF2Q9UK05 429 aaPredicted RBP8.31□□□□□ -1.08
VPS13B-211ENST00000522802 BRPF3Q9ULD4 1205 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.31□□□□□ -1.08
VPS13B-211ENST00000522802 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
VPS13B-211ENST00000522802 VCANP13611 3396 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 UFL1O94874 794 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 SASH1O94885 1247 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 ADH6P28332 368 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 PDE12Q6L8Q7 609 aaKnown RBP8.3□□□□□ -1.08
VPS13B-211ENST00000522802 GOLGA6L1Q8N7Z2 621 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 AGBL3Q8NEM8 1001 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 ZNF333Q96JL9 665 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 MDFIQ99750 246 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 MXD3Q9BW11 206 aa8.3□□□□□ -1.08
VPS13B-211ENST00000522802 GZF1Q9H116 711 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms