RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	HEXIM1	O94992	359 aa	Known RBP	11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	ASPRV1	Q53RT3	343 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	SLFN13	Q68D06	897 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	DHX32	Q7L7V1	743 aa	Known RBP	11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	GSTA5	Q7RTV2	222 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	AOPEP	Q8N6M6	819 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	EFCC1	Q9HA90	598 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	ATP6V0A2	Q9Y487	856 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	BIN1	O00499	593 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	PRPF4B	Q13523	1007 aa	Known RBP	11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	THEM5	Q8N1Q8	247 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	MAIP1	Q8WWC4	291 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	TCP11	Q8WWU5	503 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	KATNAL1	Q9BW62	490 aa		11.43	□□□□□ -0.58
TCF7-223	ENST00000522653	KRT5	P13647	590 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	ZNF157	P51786	506 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	NCAPH2	Q6IBW4	605 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	B4GALNT4	Q76KP1	1039 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	FAM76A	Q8TAV0	307 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	ESYT1	Q9BSJ8	1104 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	PCDHA1	Q9Y5I3	950 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	CTAGE9	A4FU28	777 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	CAPN9	O14815	690 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	CETN3	O15182	167 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	A1BG	P04217	495 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	AOC3	Q16853	763 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	BRINP3	Q76B58	766 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	BRF1	Q92994	677 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	SOS2	Q07890	1332 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	MYL3	P08590	195 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	HSPA1L	P34931	641 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	TXNRD1	Q16881	649 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	SYNE4	Q8N205	404 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	RBM46	Q8TBY0	533 aa	Known RBP	11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	JARID2	Q92833	1246 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	HAUS1	Q96CS2	278 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653		A0A1W2PP64	1363 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	DCDC2C	A8MYV0	355 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	WDR64	B1ANS9	1081 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	CHMP2A	O43633	222 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	KRT19	P08727	400 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	OAS2	P29728	719 aa	Known RBP	11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	FCGRT	P55899	365 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	KRT83	P78385	493 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	TNNI3K	Q59H18	835 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	AFAP1L1	Q8TED9	768 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	BICC1	Q9H694	974 aa	Known RBP	11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	AGTPBP1	Q9UPW5	1226 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653	FPGT-TNNI3K	V9GXZ4	949 aa		11.42	□□□□□ -0.58
TCF7-223	ENST00000522653		A6NNZ2	444 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	BCR	P11274	1271 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	LIG4	P49917	911 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	POLG	P54098	1239 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	PLCB3	Q01970	1234 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	INF2	Q27J81	1249 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	TUBB8	Q3ZCM7	444 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	CCDC50	Q8IVM0	306 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	EFCAB13	Q8IY85	973 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	USP26	Q9BXU7	913 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	KDM5A	P29375	1690 aa	Known RBP	11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	GNA14	O95837	355 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	R3HDM1	Q15032	1099 aa	Known RBP	11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	ERCC6L	Q2NKX8	1250 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	LETM2	Q2VYF4	491 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	MAP7D1	Q3KQU3	841 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	MAATS1	Q7Z4T9	603 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	2e-6	■■■■■ 37.8
TCF7-223	ENST00000522653	EHD2	Q9NZN4	543 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	CHD1	O14646	1710 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	LTK	P29376	864 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	PPP2R3A	Q06190	1150 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	CCDC15	Q0P6D6	951 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	TAF1C	Q15572	869 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	ATRIP	Q8WXE1	791 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	NARF	Q9UHQ1	456 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	HECW2	Q9P2P5	1572 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	MYO5C	Q9NQX4	1742 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	INPP5B	P32019	993 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	NNMT	P40261	264 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	SNAPC2	Q13487	334 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	SEL1L2	Q5TEA6	688 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	REXO1	Q8N1G1	1221 aa	Known RBP	11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	TMEM63C	Q9P1W3	806 aa		11.41	□□□□□ -0.58
TCF7-223	ENST00000522653	ZNF75D	P51815	510 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	KIF5A	Q12840	1032 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	SLC7A3	Q8WY07	619 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	TTC14	Q96N46	770 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	LARP6	Q9BRS8	491 aa	Known RBP	11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	GINM1	Q9NU53	330 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	RBM8A	Q9Y5S9	174 aa	Known RBP	11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	USP17L5	A8MUK1	530 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	PER1	O15534	1290 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	CETP	P11597	493 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	TUBB2A	Q13885	445 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	NAA25	Q14CX7	972 aa		11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	RNF219	Q5W0B1	726 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	REM2	Q8IYK8	340 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF7-223	ENST00000522653	EFHB	Q8N7U6	833 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms