RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PTPDC1A2A3K4 754 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 KLRF2D3W0D1 207 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 DHX16O60231 1041 aaKnown RBP15.58■□□□□ 0.08
CLK4-210ENST00000522136 TOMM70O94826 608 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 KIF5BP33176 963 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 SLC1A4P43007 532 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 FKBP1BP68106 108 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 ZNF543Q08ER8 600 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 TMTC3Q6ZXV5 915 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 UBA5Q9GZZ9 404 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 SH2D4AQ9H788 454 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 GOPCQ9HD26 462 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 RBM28Q9NW13 759 aaKnown RBP15.58■□□□□ 0.08
CLK4-210ENST00000522136 SMC3Q9UQE7 1217 aa15.58■□□□□ 0.08
CLK4-210ENST00000522136 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.58■□□□□ 0.08
CLK4-210ENST00000522136 BACE1P56817 501 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 FUT2Q10981 343 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 PPP2R5BQ15173 497 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 ERO1BQ86YB8 467 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 RBM46Q8TBY0 533 aaKnown RBP15.57■□□□□ 0.08
CLK4-210ENST00000522136 DCAF4Q8WV16 495 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 SLC10A4Q96EP9 437 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 SYNPO2Q9UMS6 1093 aa15.57■□□□□ 0.08
CLK4-210ENST00000522136 hCG_1642624A0A1W2PR95 340 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 SPDYE5A6NIY4 337 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 IRF6O14896 467 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 IFNAR1P17181 557 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 GJB2P29033 226 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 SLC16A2P36021 539 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 HMGCS2P54868 508 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 FAM83BQ5T0W9 1011 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 SMARCC2Q8TAQ2 1214 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 PIBF1Q8WXW3 757 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 GMCL1Q96IK5 515 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 LLPHQ9BRT6 129 aaKnown RBP15.56■□□□□ 0.08
CLK4-210ENST00000522136 CYTH3O43739 400 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 FDPSP14324 419 aaKnown RBP15.56■□□□□ 0.08
CLK4-210ENST00000522136 GJA5P36382 358 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 ASPRV1Q53RT3 343 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 CPLX2Q6PUV4 134 aaKnown RBP15.56■□□□□ 0.08
CLK4-210ENST00000522136 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 PTPRFP10586 1907 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 MYH6P13533 1939 aa15.56■□□□□ 0.08
CLK4-210ENST00000522136 BMP3P12645 472 aa15.55■□□□□ 0.08
CLK4-210ENST00000522136 PPATQ06203 517 aa15.55■□□□□ 0.08
CLK4-210ENST00000522136 VAT1LQ9HCJ6 419 aa15.55■□□□□ 0.08
CLK4-210ENST00000522136 ORC3Q9UBD5 711 aaPredicted RBP15.55■□□□□ 0.08
CLK4-210ENST00000522136 CNTNAP5Q8WYK1 1306 aa15.55■□□□□ 0.08
CLK4-210ENST00000522136 GNAQP50148 359 aa15.55■□□□□ 0.08
CLK4-210ENST00000522136 HUNKP57058 714 aa15.55■□□□□ 0.08
CLK4-210ENST00000522136 SSRP1Q08945 709 aaKnown RBP15.55■□□□□ 0.08
CLK4-210ENST00000522136 GPATCH4Q5T3I0 446 aaKnown RBP15.55■□□□□ 0.08
CLK4-210ENST00000522136 V9GY48 417 aaPredicted RBP15.55■□□□□ 0.08
CLK4-210ENST00000522136 C19orf81C9J6K1 198 aa15.54■□□□□ 0.08
CLK4-210ENST00000522136 TMEM232C9JQI7 657 aa15.54■□□□□ 0.08
CLK4-210ENST00000522136 CDKL5O76039 1030 aa15.54■□□□□ 0.08
CLK4-210ENST00000522136 FMNL1O95466 1100 aaPredicted RBP15.54■□□□□ 0.08
CLK4-210ENST00000522136 VCAM1P19320 739 aa15.54■□□□□ 0.08
CLK4-210ENST00000522136 FOSBP53539 338 aa15.54■□□□□ 0.08
CLK4-210ENST00000522136 USP14P54578 494 aa15.54■□□□□ 0.08
CLK4-210ENST00000522136 MKRN3Q13064 507 aaKnown RBP15.54■□□□□ 0.08
CLK4-210ENST00000522136 AIFM3Q96NN9 605 aa15.54■□□□□ 0.08
CLK4-210ENST00000522136 UNCXA6NJT0 531 aa15.53■□□□□ 0.08
CLK4-210ENST00000522136 PPIL2Q13356 520 aa15.53■□□□□ 0.08
CLK4-210ENST00000522136 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
CLK4-210ENST00000522136 FBXO28Q9NVF7 368 aa15.53■□□□□ 0.08
CLK4-210ENST00000522136 HMGN5P82970 282 aaKnown RBP15.53■□□□□ 0.08
CLK4-210ENST00000522136 IKQ13123 557 aaPredicted RBP15.53■□□□□ 0.08
CLK4-210ENST00000522136 SAPCD2Q86UD0 394 aa15.53■□□□□ 0.08
CLK4-210ENST00000522136 ADGRF4Q8IZF3 695 aa15.53■□□□□ 0.08
CLK4-210ENST00000522136 LPAR1Q92633 364 aa15.53■□□□□ 0.08
CLK4-210ENST00000522136 LZTS2Q9BRK4 669 aa15.53■□□□□ 0.08
CLK4-210ENST00000522136 CWC22Q9HCG8 908 aaKnown RBP15.53■□□□□ 0.08
CLK4-210ENST00000522136 PRPF3O43395 683 aaKnown RBP15.52■□□□□ 0.07
CLK4-210ENST00000522136 DDIT3P35638 169 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 SNAP25P60880 206 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 PKN1Q16512 942 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 SH3D19Q5HYK7 790 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 FAM184AQ8NB25 1140 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 WNK4Q96J92 1243 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 C12orf42Q96LP6 360 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 RNF26Q9BY78 433 aaPredicted RBP15.52■□□□□ 0.07
CLK4-210ENST00000522136 RPAP3Q9H6T3 665 aaPredicted RBP15.52■□□□□ 0.07
CLK4-210ENST00000522136 RIOX1Q9H6W3 641 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 GJB4Q9NTQ9 266 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 TMOD4Q9NZQ9 345 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 KCNH4Q9UQ05 1017 aa15.52■□□□□ 0.07
CLK4-210ENST00000522136 CXCL11O14625 94 aa15.51■□□□□ 0.07
CLK4-210ENST00000522136 WDR46O15213 610 aaKnown RBP15.51■□□□□ 0.07
CLK4-210ENST00000522136 FSTL1Q12841 308 aa15.51■□□□□ 0.07
CLK4-210ENST00000522136 GADL1Q6ZQY3 521 aa15.51■□□□□ 0.07
CLK4-210ENST00000522136 HOMER1Q86YM7 354 aa15.51■□□□□ 0.07
CLK4-210ENST00000522136 PIGSQ96S52 555 aa15.51■□□□□ 0.07
CLK4-210ENST00000522136 TANGO6Q9C0B7 1094 aa15.51■□□□□ 0.07
CLK4-210ENST00000522136 JMJD4Q9H9V9 463 aa15.51■□□□□ 0.07
CLK4-210ENST00000522136 A0A0G2JLL6 359 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms