RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
LAMA4-219ENST00000522006 PRPF31Q8WWY3 499 aaKnown RBP12.55□□□□□ -0.4
LAMA4-219ENST00000522006 CAPS2Q9BXY5 557 aa12.55□□□□□ -0.4
LAMA4-219ENST00000522006 USH1CQ9Y6N9 552 aa12.55□□□□□ -0.4
LAMA4-219ENST00000522006 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 XRCC5P13010 732 aaKnown RBP12.54□□□□□ -0.4
LAMA4-219ENST00000522006 MAP2K2P36507 400 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
LAMA4-219ENST00000522006 PPARAQ07869 468 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-219ENST00000522006 CPXCR1Q8N123 301 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 BABAM1Q9NWV8 329 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 SMCO2A6NFE2 343 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 STAM2O75886 525 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 P4HA1P13674 534 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 STAT1P42224 750 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
LAMA4-219ENST00000522006 DPH5Q9H2P9 285 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 FAM102BQ5T8I3 360 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 MAP3K21Q5TCX8 1036 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 OR8K1Q8NGG5 319 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 OPHN1O60890 802 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 BRD1O95696 1058 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 BAG2O95816 211 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 IRX4P78413 519 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 TCP10Q12799 353 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
LAMA4-219ENST00000522006 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
LAMA4-219ENST00000522006 TFAP4Q01664 338 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 MYOCDQ8IZQ8 938 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 CMTR1Q8N1G2 835 aaKnown RBP12.53□□□□□ -0.4
LAMA4-219ENST00000522006 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 RPS6KA2Q15349 733 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 TSC1Q92574 1164 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 EFCAB8A8MWE9 144 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 TECP42680 631 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 MYSM1Q5VVJ2 828 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 PHLDB3Q6NSJ2 640 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 CAPN12Q6ZSI9 719 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 EFCC1Q9HA90 598 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 HOMER3Q9NSC5 361 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 IL13P35225 146 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 VCX3AQ9NNX9 186 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 PANK4Q9NVE7 773 aa12.53□□□□□ -0.4
LAMA4-219ENST00000522006 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 IFNB1P01574 187 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 SESN3P58005 492 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 NSMFQ6X4W1 530 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 MIER3Q7Z3K6 550 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 LRRC8AQ8IWT6 810 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 HVCN1Q96D96 273 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 THAP12O43422 761 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 OTUD6AQ7L8S5 288 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 RSPH3Q86UC2 560 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 TESK2Q96S53 571 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 ST7Q9NRC1 585 aa12.52□□□□□ -0.4
LAMA4-219ENST00000522006 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 GAS7O60861 476 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 HOXB7P09629 217 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 DIXDC1Q155Q3 683 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 SCYL2Q6P3W7 929 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.41
LAMA4-219ENST00000522006 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 ZNF654Q8IZM8 581 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 SCYL1Q96KG9 808 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 SEPT10Q9P0V9 454 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 PDE6CP51160 858 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 SPATS2Q86XZ4 545 aaKnown RBP12.52□□□□□ -0.41
LAMA4-219ENST00000522006 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
LAMA4-219ENST00000522006 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-219ENST00000522006 GCKRQ14397 625 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 CCNL1Q9UK58 526 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 IVNS1ABPQ9Y6Y0 642 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 ZMYM6O95789 1325 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 HIP1RO75146 1068 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 ATF7P17544 494 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 VPS41P49754 854 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 TRIM50Q86XT4 487 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 DEPTORQ8TB45 409 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 ZSCAN10Q96SZ4 725 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 FRMPD2Q68DX3 1309 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 CNGA1P29973 690 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 TTC19Q6DKK2 380 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-219ENST00000522006 M0QZ92 97 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 KRT3P12035 628 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 GCKP35557 465 aa12.51□□□□□ -0.41
LAMA4-219ENST00000522006 POLR2FP61218 127 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms