RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 METTL16Q86W50 562 aaKnown RBP9.98□□□□□ -0.81
VPS13B-210ENST00000521932 KLF16Q9BXK1 252 aaPredicted RBP9.98□□□□□ -0.81
VPS13B-210ENST00000521932 IL25Q9H293 177 aa9.98□□□□□ -0.81
VPS13B-210ENST00000521932 CDC45O75419 566 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 ADH1CP00326 375 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 NR3C2P08235 984 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 HSPD1P10809 573 aaKnown RBP9.97□□□□□ -0.81
VPS13B-210ENST00000521932 GRM5P41594 1212 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 AGERQ15109 404 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 ALX1Q15699 326 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 SBK1Q52WX2 424 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 PRAMEF18Q5VWM3 479 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 CST9Q5W186 159 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 CTR9Q6PD62 1173 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 CASC1Q6TDU7 716 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 CCDC129Q6ZRS4 1044 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 BPHLQ86WA6 291 aaPredicted RBP9.97□□□□□ -0.81
VPS13B-210ENST00000521932 FOXP4Q8IVH2 680 aaPredicted RBP9.97□□□□□ -0.81
VPS13B-210ENST00000521932 MAPKAPK5Q8IW41 473 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 IFNL3Q8IZI9 196 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 HOOK2Q96ED9 719 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 CDCA5Q96FF9 252 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 DSCC1Q9BVC3 393 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 PI4KBQ9UBF8 816 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 PALD1Q9ULE6 856 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 AK9Q5TCS8 1911 aa9.97□□□□□ -0.81
VPS13B-210ENST00000521932 FOCADQ5VW36 1801 aa9.96□□□□□ -0.81
VPS13B-210ENST00000521932 USP17L12C9JPN9 530 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 USP17L21D6R901 530 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 CAPN5O15484 640 aaPredicted RBP9.96□□□□□ -0.82
VPS13B-210ENST00000521932 FGAP02671 866 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 APPP05067 770 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 RFC5P40937 340 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 PLCD1P51178 756 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 FKBP1BP68106 108 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 FMR1Q06787 632 aaKnown RBP eCLIP9.96□□□□□ -0.82
VPS13B-210ENST00000521932 MAP3K11Q16584 847 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 C12orf60Q5U649 245 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 VPS53Q5VIR6 699 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 TTC6Q86TZ1 520 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 CSRNP1Q96S65 589 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 OCSTAMPQ9BR26 566 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 ESYT1Q9BSJ8 1104 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 NACAP1Q9BZK3 213 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 EHD4Q9H223 541 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 EPB41L4AQ9HCS5 686 aaPredicted RBP9.96□□□□□ -0.82
VPS13B-210ENST00000521932 MCM9Q9NXL9 1143 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 ZMYM6O95789 1325 aa9.96□□□□□ -0.82
VPS13B-210ENST00000521932 UNCXA6NJT0 531 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 USP2O75604 605 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-210ENST00000521932 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-210ENST00000521932 TIMP2P16035 220 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 NF2P35240 595 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 GABPAQ06546 454 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 ARID5BQ14865 1188 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 ZSCAN29Q8IWY8 852 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-210ENST00000521932 MAP4K1Q92918 833 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 TRIM47Q96LD4 638 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 ARPP21Q9UBL0 812 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-210ENST00000521932 HERC5Q9UII4 1024 aaKnown RBP9.95□□□□□ -0.82
VPS13B-210ENST00000521932 CDK5RAP2Q96SN8 1893 aa9.95□□□□□ -0.82
VPS13B-210ENST00000521932 SSC5DA1L4H1 1573 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 A6NJR5 290 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 PHF20L1A8MW92 1017 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 PPP1R12BO60237 982 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-210ENST00000521932 CELF2O95319 508 aaKnown RBP9.94□□□□□ -0.82
VPS13B-210ENST00000521932 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 MCM6Q14566 821 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 LCE2AQ5TA79 106 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-210ENST00000521932 DCAF15Q66K64 600 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 MIGA2Q7L4E1 593 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 AMOTL1Q8IY63 956 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 NAPBQ9H115 298 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 SAP30BPQ9UHR5 308 aaKnown RBP9.94□□□□□ -0.82
VPS13B-210ENST00000521932 FKBPLQ9UIM3 349 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 SERPINB13Q9UIV8 391 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 ZNF112Q9UJU3 913 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 ANAPC4Q9UJX5 808 aa9.94□□□□□ -0.82
VPS13B-210ENST00000521932 DDX60LQ5H9U9 1706 aaKnown RBP9.93□□□□□ -0.82
VPS13B-210ENST00000521932 TMEM88BA6NKF7 163 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 EPB41L2O43491 1005 aaKnown RBP9.93□□□□□ -0.82
VPS13B-210ENST00000521932 TDO2P48775 406 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 C1QTNF8P60827 252 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 PTH1RQ03431 593 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 TATDN1Q6P1N9 297 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 KIAA1211Q6ZU35 1233 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 SAPCD2Q86UD0 394 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 C2orf69Q8N8R5 385 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.93□□□□□ -0.82
VPS13B-210ENST00000521932 ZNF341Q9BYN7 854 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 LSG1Q9H089 658 aaKnown RBP9.93□□□□□ -0.82
VPS13B-210ENST00000521932 DNAJC18Q9H819 358 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.93□□□□□ -0.82
VPS13B-210ENST00000521932 GBA2Q9HCG7 927 aaPredicted RBP9.93□□□□□ -0.82
VPS13B-210ENST00000521932 CTNNA3Q9UI47 895 aa9.93□□□□□ -0.82
VPS13B-210ENST00000521932 ROBO3Q96MS0 1386 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms