RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 SLF1Q9BQI6 1058 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 PARP3Q9Y6F1 533 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 ZNF804BA4D1E1 1349 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 XDHP47989 1333 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 MYH3P11055 1940 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 CCP110O43303 1012 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 PICALMQ13492 652 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 LETM2Q2VYF4 491 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 NELFBQ8WX92 580 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 HPS3Q969F9 1004 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
DENND3-217ENST00000521835 CCDC175P0C221 793 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 RHOXF2BP0C7M4 288 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 ZNF18P17022 549 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 GYS2P54840 703 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 FUT2Q10981 343 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 CCDC178Q5BJE1 867 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
DENND3-217ENST00000521835 RHOXF2Q9BQY4 288 aa13.75□□□□□ -0.21
DENND3-217ENST00000521835 LDHBP07195 334 aaKnown RBP13.74□□□□□ -0.21
DENND3-217ENST00000521835 TPM1P09493 284 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 UBXN1Q04323 297 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 SPATA1Q5VX52 437 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 ZCCHC17Q9NP64 241 aaKnown RBP13.74□□□□□ -0.21
DENND3-217ENST00000521835 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
DENND3-217ENST00000521835 TXLNAP40222 546 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 UBA7P41226 1012 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 KRT31Q15323 416 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 IL17AQ16552 155 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 AK7Q96M32 723 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
DENND3-217ENST00000521835 UBA5Q9GZZ9 404 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 ARGLU1Q9NWB6 273 aaPredicted RBP13.74□□□□□ -0.21
DENND3-217ENST00000521835 TRIM10Q9UDY6 481 aa13.74□□□□□ -0.21
DENND3-217ENST00000521835 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 TRIM47Q96LD4 638 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
DENND3-217ENST00000521835 PLEKHG2Q9H7P9 1386 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 SARSP49591 514 aaKnown RBP13.73□□□□□ -0.21
DENND3-217ENST00000521835 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 BRIP1Q9BX63 1249 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 L2HGDHQ9H9P8 463 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 GUCA1BQ9UMX6 200 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
DENND3-217ENST00000521835 MYH14Q7Z406 1995 aaKnown RBP13.73□□□□□ -0.21
DENND3-217ENST00000521835 FAM237AA0A1B0GTK4 181 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
DENND3-217ENST00000521835 PAK1Q13153 545 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 NPY5RQ15761 445 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
DENND3-217ENST00000521835 MTRQ99707 1265 aa13.73□□□□□ -0.21
DENND3-217ENST00000521835 ENC1O14682 589 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 KIF5CO60282 957 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 STX10O60499 249 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 SLURP2P0DP57 97 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 KIF5BP33176 963 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 KRT9P35527 623 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 NAPAP54920 295 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 NR1I3Q14994 352 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
DENND3-217ENST00000521835 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 FAM170AA1A519 330 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 PPP1R3GB7ZBB8 358 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 CALM1P0DP23 149 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 CALM2P0DP24 149 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 CALM3P0DP25 149 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 RFC4P35249 363 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 MCM6Q14566 821 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 AMOTL1Q8IY63 956 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 ANKRD20A12PQ8NF67 263 aa13.72□□□□□ -0.21
DENND3-217ENST00000521835 PHLPP2Q6ZVD8 1323 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 CCDC66A2RUB6 948 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 TADA3O75528 432 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 GYPCP04921 128 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 PNMA6AP0CW24 399 aaPredicted RBP13.71□□□□□ -0.21
DENND3-217ENST00000521835 PRCPP42785 496 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
DENND3-217ENST00000521835 SMARCC1Q92922 1105 aaPredicted RBP13.71□□□□□ -0.21
DENND3-217ENST00000521835 RTCBQ9Y3I0 505 aaKnown RBP13.71□□□□□ -0.21
DENND3-217ENST00000521835 KCNJ18B7U540 433 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 CCNT1O60563 726 aaKnown RBP13.71□□□□□ -0.21
DENND3-217ENST00000521835 RPN1P04843 607 aaKnown RBP13.71□□□□□ -0.21
DENND3-217ENST00000521835 KCNJ12Q14500 433 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 SYCP1Q15431 976 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 DTHD1Q6ZMT9 781 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 SLC35F6Q8N357 371 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 CAPZA3Q96KX2 299 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 GDAP1L1Q96MZ0 367 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 IL17RBQ9NRM6 502 aa13.71□□□□□ -0.21
DENND3-217ENST00000521835 MYH13Q9UKX3 1938 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms