RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 WDR19Q8NEZ3 1342 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 TSPY2A6NKD2 308 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 SLC25A27O95847 323 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 MROH8Q9H579 483 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 GJD2Q9UKL4 321 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 COL11A1P12107 1806 aaPredicted RBP11.17□□□□□ -0.62
CLK4-209ENST00000521621 NDUFB10O96000 172 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 HOXC6P09630 235 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 PSMC4P43686 418 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 CAP1Q01518 475 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 MORN1Q5T089 497 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
CLK4-209ENST00000521621 SLC15A5A6NIM6 579 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 STRNO43815 780 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 PRPF38AQ8NAV1 312 aaKnown RBP11.16□□□□□ -0.62
CLK4-209ENST00000521621 COA7Q96BR5 231 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 NECTIN1Q15223 517 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 TKFCQ3LXA3 575 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 SLF1Q9BQI6 1058 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 TXNRD2Q9NNW7 524 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 NEDD4P46934 1319 aa11.16□□□□□ -0.62
CLK4-209ENST00000521621 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
CLK4-209ENST00000521621 VWA5AO00534 786 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 PRDM1O75626 825 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 CYP21A2P08686 494 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 BMP3P12645 472 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 PTH1RQ03431 593 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 KIAA1211Q6ZU35 1233 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 IQCA1Q86XH1 822 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 CHURC1Q8WUH1 139 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
CLK4-209ENST00000521621 GRB14Q14449 540 aa11.15□□□□□ -0.63
CLK4-209ENST00000521621 FAM47AQ5JRC9 791 aa11.15□□□□□ -0.63
CLK4-209ENST00000521621 SLFN13Q68D06 897 aa11.15□□□□□ -0.63
CLK4-209ENST00000521621 PLEKHH3Q7Z736 793 aa11.15□□□□□ -0.63
CLK4-209ENST00000521621 NBPF11Q86T75 865 aa11.15□□□□□ -0.63
CLK4-209ENST00000521621 ZNF333Q96JL9 665 aa11.15□□□□□ -0.63
CLK4-209ENST00000521621 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.63
CLK4-209ENST00000521621 BTBD7Q9P203 1132 aa11.15□□□□□ -0.63
CLK4-209ENST00000521621 DIS3Q9Y2L1 958 aaKnown RBP11.15□□□□□ -0.63
CLK4-209ENST00000521621 RANBP6O60518 1105 aaKnown RBP11.14□□□□□ -0.63
CLK4-209ENST00000521621 SEC23AQ15436 765 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 ARHGAP39Q9C0H5 1083 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 SPATC1LQ9H0A9 340 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 SLC38A10Q9HBR0 1119 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 TNPO2O14787 897 aaKnown RBP11.14□□□□□ -0.63
CLK4-209ENST00000521621 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
CLK4-209ENST00000521621 PTPREP23469 700 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 GPATCH4Q5T3I0 446 aaKnown RBP11.14□□□□□ -0.63
CLK4-209ENST00000521621 CLEC10AQ8IUN9 316 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 NCOA7Q8NI08 942 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 IL17RAQ96F46 866 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 NRBP1Q9UHY1 535 aa11.14□□□□□ -0.63
CLK4-209ENST00000521621 ZNF214Q9UL59 606 aaPredicted RBP11.14□□□□□ -0.63
CLK4-209ENST00000521621 RBM8AQ9Y5S9 174 aaKnown RBP11.14□□□□□ -0.63
CLK4-209ENST00000521621 LOC102724159A0A0B4J2E5 919 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 FLOT1O75955 427 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 PWP2Q15269 919 aaKnown RBP11.13□□□□□ -0.63
CLK4-209ENST00000521621 Q3C1V9 767 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 FAM83BQ5T0W9 1011 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 GPR142Q7Z601 462 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 MB21D2Q8IYB1 491 aaPredicted RBP11.13□□□□□ -0.63
CLK4-209ENST00000521621 MSL3Q8N5Y2 521 aaKnown RBP11.13□□□□□ -0.63
CLK4-209ENST00000521621 PTCH2Q9Y6C5 1203 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 E7EWF7 191 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
CLK4-209ENST00000521621 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
CLK4-209ENST00000521621 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
CLK4-209ENST00000521621 SMARCA1P28370 1054 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 RGS2P41220 211 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 STAT2P52630 851 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 TRDNQ13061 729 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 KRT32Q14532 448 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 APBA2Q99767 749 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 MOV10L1Q9BXT6 1211 aaKnown RBP11.12□□□□□ -0.63
CLK4-209ENST00000521621 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 ZBED4O75132 1171 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 PDHBP11177 359 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 HAND2P61296 217 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 PRKCZQ05513 592 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 TMEM132BQ14DG7 1078 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 ASPRV1Q53RT3 343 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 ZNF467Q7Z7K2 595 aaPredicted RBP11.12□□□□□ -0.63
CLK4-209ENST00000521621 TMTC2Q8N394 836 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 ATG4CQ96DT6 458 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 TMEM87BQ96K49 555 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 TEX13BQ9BXU2 312 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms