RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 BRF1Q92994 677 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 PPP1R14AQ96A00 147 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 HAUS7Q99871 368 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 TRIT1Q9H3H1 467 aaKnown RBP7.89□□□□□ -1.15
SKP1-208ENST00000521216 PCMTD2Q9NV79 361 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 GFOD1Q9NXC2 390 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 ZNF451Q9Y4E5 1061 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 SNX11Q9Y5W9 270 aa7.89□□□□□ -1.15
SKP1-208ENST00000521216 SCO2A0A1W2PP80 73 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 CD247P20963 164 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 CD97P48960 835 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 NBPF6Q5VWK0 638 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 NBPF4Q96M43 638 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 DSCC1Q9BVC3 393 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 DUSP15Q9H1R2 295 aaPredicted RBP7.88□□□□□ -1.15
SKP1-208ENST00000521216 ATP13A1Q9HD20 1204 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 MINPP1Q9UNW1 487 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 SUGT1Q9Y2Z0 365 aa7.88□□□□□ -1.15
SKP1-208ENST00000521216 PRAMEF1O95521 474 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 ITGA4P13612 1032 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 TPP2P29144 1249 aaPredicted RBP7.87□□□□□ -1.15
SKP1-208ENST00000521216 CD96P40200 585 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 PRKCQQ04759 706 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 IKZF1Q13422 519 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 ADCY4Q8NFM4 1077 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 ASB11Q8WXH4 323 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 GPR62Q9BZJ7 368 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 GBP3Q9H0R5 595 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 GP6Q9HCN6 339 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 SIRPGQ9P1W8 387 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 VAV3Q9UKW4 847 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 ANGEL1Q9UNK9 670 aaKnown RBP7.87□□□□□ -1.15
SKP1-208ENST00000521216 SLC5A6Q9Y289 635 aa7.87□□□□□ -1.15
SKP1-208ENST00000521216 PITPNM2Q9BZ72 1349 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 ANKRD34BA5PLL1 514 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 SHOXO15266 292 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 CBFA2T2O43439 604 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 BCL7CQ8WUZ0 217 aaPredicted RBP7.86□□□□□ -1.15
SKP1-208ENST00000521216 MISP3Q96FF7 219 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 APBA2Q99767 749 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 CHST7Q9NS84 486 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 SEMA3GQ9NS98 782 aa7.86□□□□□ -1.15
SKP1-208ENST00000521216 SIGLEC6O43699 453 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 PPM1BO75688 479 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 ZNF445P59923 1031 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 PPP2R5DQ14738 602 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 SV2CQ496J9 727 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 MRM1Q6IN84 353 aaKnown RBP7.85□□□□□ -1.15
SKP1-208ENST00000521216 EEPD1Q7L9B9 569 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 THAP5Q7Z6K1 395 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 TSPYL5Q86VY4 417 aaPredicted RBP7.85□□□□□ -1.15
SKP1-208ENST00000521216 DTX1Q86Y01 620 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 CREG2Q8IUH2 290 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 STK11IPQ8N1F8 1099 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 FLCNQ8NFG4 579 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 SRPK1Q96SB4 655 aaKnown RBP7.85□□□□□ -1.15
SKP1-208ENST00000521216 LNPKQ9C0E8 428 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 KLHL25Q9H0H3 589 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 NOL6Q9H6R4 1146 aaKnown RBP7.85□□□□□ -1.15
SKP1-208ENST00000521216 ZSWIM4Q9H7M6 989 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 LRP2BPQ9P2M1 347 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 CCDC39Q9UFE4 941 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 DUSP13Q9UII6 198 aa7.85□□□□□ -1.15
SKP1-208ENST00000521216 SSU72P8A0A1W2PR75 194 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 SUSD5O60279 629 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 IGSF3O75054 1194 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 NAT2P11245 290 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 SRFP11831 508 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 LTKP29376 864 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 CCDC144BQ3MJ40 725 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 ZNF574Q6ZN55 896 aaPredicted RBP7.84□□□□□ -1.15
SKP1-208ENST00000521216 DPH6Q7L8W6 267 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 FIBCD1Q8N539 461 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.15
SKP1-208ENST00000521216 SYTL5Q8TDW5 730 aaPredicted RBP7.84□□□□□ -1.15
SKP1-208ENST00000521216 OSBPL2Q9H1P3 480 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 WHRNQ9P202 907 aa7.84□□□□□ -1.15
SKP1-208ENST00000521216 CD8BP10966 210 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 SPINK2P20155 84 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 BMS1Q14692 1282 aaKnown RBP7.83□□□□□ -1.16
SKP1-208ENST00000521216 SPRED2Q7Z698 418 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 VSIG10LQ86VR7 867 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 ZNF655Q8N720 491 aaPredicted RBP7.83□□□□□ -1.16
SKP1-208ENST00000521216 DAGLBQ8NCG7 672 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 ZDHHC15Q96MV8 337 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 HDAC8Q9BY41 377 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 APEX2Q9UBZ4 518 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 SUSD2Q9UGT4 822 aa7.83□□□□□ -1.16
SKP1-208ENST00000521216 KIAA1324LA8MWY0 1029 aaPredicted RBP7.82□□□□□ -1.16
SKP1-208ENST00000521216 PDPK1O15530 556 aa7.82□□□□□ -1.16
SKP1-208ENST00000521216 HYAL3O43820 417 aaPredicted RBP7.82□□□□□ -1.16
SKP1-208ENST00000521216 WNT11O96014 354 aa7.82□□□□□ -1.16
SKP1-208ENST00000521216 SERINC3Q13530 473 aa7.82□□□□□ -1.16
SKP1-208ENST00000521216 LRP8Q14114 963 aa7.82□□□□□ -1.16
SKP1-208ENST00000521216 CWF19L1Q69YN2 538 aaKnown RBP7.82□□□□□ -1.16
SKP1-208ENST00000521216 TMPRSS7Q7RTY8 843 aa7.82□□□□□ -1.16
SKP1-208ENST00000521216 TP53INP2Q8IXH6 220 aa7.82□□□□□ -1.16
SKP1-208ENST00000521216 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
SKP1-208ENST00000521216 TCTN2Q96GX1 697 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms