RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ADGRE2Q9UHX3 823 aa8.68□□□□□ -1.02
PABPC1-216ENST00000520868 C1orf167Q5SNV9 1468 aa8.68□□□□□ -1.02
PABPC1-216ENST00000520868 XRN1Q8IZH2 1706 aaKnown RBP8.68□□□□□ -1.02
PABPC1-216ENST00000520868 RGS12O14924 1447 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 LIG3P49916 1009 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 PTPN11Q06124 597 aaPredicted RBP8.67□□□□□ -1.02
PABPC1-216ENST00000520868 INPP5AQ14642 412 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 LRFN4Q6PJG9 635 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 WFDC3Q8IUB2 231 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 TOP6BLQ8N6T0 577 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 ROBO2Q9HCK4 1378 aa8.67□□□□□ -1.02
PABPC1-216ENST00000520868 CDK12Q9NYV4 1490 aaPredicted RBP8.67□□□□□ -1.02
PABPC1-216ENST00000520868 PRAMEF27A3QJZ7 478 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
PABPC1-216ENST00000520868 ARHGAP27Q6ZUM4 889 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 CYFIP1Q7L576 1253 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 STK11IPQ8N1F8 1099 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 PLD6Q8N2A8 252 aaKnown RBP8.66□□□□□ -1.02
PABPC1-216ENST00000520868 MISP3Q96FF7 219 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 PLPPR2Q96GM1 343 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 BCL11AQ9H165 835 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 MIR1-1HGQ9H1L0 117 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 SPHKAPQ2M3C7 1700 aa8.66□□□□□ -1.02
PABPC1-216ENST00000520868 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 NEXMIFQ5QGS0 1516 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 USP31Q70CQ4 1352 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 WIPI1Q5MNZ9 446 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-216ENST00000520868 NETO1Q8TDF5 533 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 FAM161BQ96MY7 647 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 KRTAP4-12Q9BQ66 201 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 PAK6Q9NQU5 681 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-216ENST00000520868 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 STK26Q9P289 416 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 VTI1BQ9UEU0 232 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 TRPC5Q9UL62 973 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-216ENST00000520868 TACC3Q9Y6A5 838 aa8.65□□□□□ -1.02
PABPC1-216ENST00000520868 CLTCL1P53675 1640 aa8.65□□□□□ -1.03
PABPC1-216ENST00000520868 RPGRIP1LQ68CZ1 1315 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 RBAK-RBAKDNI3L0D1 243 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 LRIG2O94898 1065 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 CTSHP09668 335 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 BNIP3Q12983 259 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 LCE3BQ5TA77 95 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 TP53INP2Q8IXH6 220 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 AGBL5Q8NDL9 886 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 FLCNQ8NFG4 579 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 GTF2IRD1Q9UHL9 959 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 SLC5A6Q9Y289 635 aa8.64□□□□□ -1.03
PABPC1-216ENST00000520868 NAIPQ13075 1403 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 SRCAPQ6ZRS2 3230 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 CD96P40200 585 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 CDK8P49336 464 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 ETF1P62495 437 aaKnown RBP8.63□□□□□ -1.03
PABPC1-216ENST00000520868 SEPT6Q14141 434 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 RGL3Q3MIN7 710 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-216ENST00000520868 ARMCX6Q7L4S7 300 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 WAPLQ7Z5K2 1190 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 SPRED2Q7Z698 418 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 PCDHB5Q9Y5E4 795 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 NALCNQ8IZF0 1738 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 PTCH1Q13635 1447 aa8.63□□□□□ -1.03
PABPC1-216ENST00000520868 NPHP3Q7Z494 1330 aa8.62□□□□□ -1.03
PABPC1-216ENST00000520868 ADGRF5Q8IZF2 1346 aa8.62□□□□□ -1.03
PABPC1-216ENST00000520868 CAP2P40123 477 aa8.62□□□□□ -1.03
PABPC1-216ENST00000520868 TSNAXIP1Q2TAA8 658 aa8.62□□□□□ -1.03
PABPC1-216ENST00000520868 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
PABPC1-216ENST00000520868 IGF2BP3O00425 579 aaKnown RBP eCLIP8.61□□□□□ -1.032e-9■■■■■ 27.8
PABPC1-216ENST00000520868 CEACAM5P06731 702 aa8.61□□□□□ -1.03
PABPC1-216ENST00000520868 TFE3P19532 575 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-216ENST00000520868 OXCT1P55809 520 aa8.61□□□□□ -1.03
PABPC1-216ENST00000520868 TAGLNQ01995 201 aaKnown RBP8.61□□□□□ -1.03
PABPC1-216ENST00000520868 IFI16Q16666 785 aaKnown RBP8.61□□□□□ -1.03
PABPC1-216ENST00000520868 TMEM132EQ6IEE7 984 aa8.61□□□□□ -1.03
PABPC1-216ENST00000520868 CCDC84Q86UT8 332 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-216ENST00000520868 HID1Q8IV36 788 aa8.61□□□□□ -1.03
PABPC1-216ENST00000520868 BCL2L13Q9BXK5 485 aa8.61□□□□□ -1.03
PABPC1-216ENST00000520868 HFM1A2PYH4 1435 aa8.61□□□□□ -1.03
PABPC1-216ENST00000520868 RRBP1Q9P2E9 1410 aaKnown RBP8.61□□□□□ -1.03
PABPC1-216ENST00000520868 KIF1BO60333 1816 aa8.61□□□□□ -1.03
PABPC1-216ENST00000520868 TMEM265A0A087WTH1 108 aa8.6□□□□□ -1.03
PABPC1-216ENST00000520868 BTBD11A6QL63 1104 aa8.6□□□□□ -1.03
PABPC1-216ENST00000520868 PWP1Q13610 501 aa8.6□□□□□ -1.03
PABPC1-216ENST00000520868 MFSD2AQ8NA29 543 aa8.6□□□□□ -1.03
PABPC1-216ENST00000520868 HEXIM2Q96MH2 286 aaKnown RBP8.6□□□□□ -1.03
PABPC1-216ENST00000520868 FOXQ1Q9C009 403 aa8.6□□□□□ -1.03
PABPC1-216ENST00000520868 VAV3Q9UKW4 847 aa8.6□□□□□ -1.03
PABPC1-216ENST00000520868 PLAGL2Q9UPG8 496 aa8.6□□□□□ -1.03
PABPC1-216ENST00000520868 GFRA2O00451 464 aa8.59□□□□□ -1.03
PABPC1-216ENST00000520868 RPL6Q02878 288 aaKnown RBP8.59□□□□□ -1.03
PABPC1-216ENST00000520868 PRKCQQ04759 706 aa8.59□□□□□ -1.03
PABPC1-216ENST00000520868 PDE4BQ07343 736 aa8.59□□□□□ -1.03
PABPC1-216ENST00000520868 TMCO4Q5TGY1 634 aa8.59□□□□□ -1.03
PABPC1-216ENST00000520868 CBLL1Q75N03 491 aa8.59□□□□□ -1.03
PABPC1-216ENST00000520868 PHC3Q8NDX5 983 aa8.59□□□□□ -1.03
PABPC1-216ENST00000520868 ATRNO75882 1429 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms