RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 HSPD1P10809 573 aaKnown RBP17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 PTPREP23469 700 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 CTDSPL2Q05D32 466 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 MAP2K5Q13163 448 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 SHCBP1Q8NEM2 672 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 U2AF1L4Q8WU68 220 aaKnown RBP17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 TRIB2Q92519 343 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 ATG4CQ96DT6 458 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 APBA2Q99767 749 aa17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 MOV10L1Q9BXT6 1211 aaKnown RBP17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 PAK6Q9NQU5 681 aaPredicted RBP17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
R3HCC1-206ENST00000520480 STRNO43815 780 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 SGPL1O95470 568 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 NDUFB10O96000 172 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 GRB14Q14449 540 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 PLS1Q14651 629 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 GMCL1P1Q8NEA9 526 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 SHISA4Q96DD7 197 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 DEFB118Q96PH6 123 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 MROH8Q9H579 483 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 ADAMTS5Q9UNA0 930 aa17.04■□□□□ 0.32
R3HCC1-206ENST00000520480 RPTORQ8N122 1335 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 ORC4O43929 436 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 FGRP09769 529 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 ERCC3P19447 782 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 PDE4AP27815 886 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 PRPF38BQ5VTL8 546 aaKnown RBP17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 NUP88Q99567 741 aaPredicted RBP17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 SLF1Q9BQI6 1058 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 HMX1Q9NP08 348 aaPredicted RBP17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 FBXO28Q9NVF7 368 aa17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
R3HCC1-206ENST00000520480 VWA5AO00534 786 aa17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 RANBP6O60518 1105 aaKnown RBP17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 SLC25A27O95847 323 aa17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 HOXC6P09630 235 aa17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 TMEM132BQ14DG7 1078 aa17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 MAP3K21Q5TCX8 1036 aa17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 NCAPG2Q86XI2 1143 aa17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 LRRC47Q8N1G4 583 aaKnown RBP17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 STX8Q9UNK0 236 aa17.02■□□□□ 0.32
R3HCC1-206ENST00000520480 ZNF236Q9UL36 1845 aa17.02■□□□□ 0.31
R3HCC1-206ENST00000520480 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 COPB2P35606 906 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 TRIM32Q13049 653 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 SLFN13Q68D06 897 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 ABRAQ8N0Z2 381 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 PRPF38AQ8NAV1 312 aaKnown RBP17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 CRISPLD2Q9H0B8 497 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 INCENPQ9NQS7 918 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
R3HCC1-206ENST00000520480 ADORA2AP29274 412 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 STAT3P40763 770 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 CCL14Q16627 93 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 MFSD14CQ5VZR4 134 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 DPP9Q86TI2 863 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 RIOX2Q8IUF8 465 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 SLC5A4Q9NY91 659 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 FEM1BQ9UK73 627 aa17■□□□□ 0.31
R3HCC1-206ENST00000520480 FARP2O94887 1054 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 FCER1AP12319 257 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 BMP3P12645 472 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 HAND2P61296 217 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 CACNB2Q08289 660 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 RRP12Q5JTH9 1297 aaKnown RBP16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 AKNAD1Q5T1N1 836 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 MFSD6Q6ZSS7 791 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 REPS2Q8NFH8 660 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 GMCL1Q96IK5 515 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 TEX13BQ9BXU2 312 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 RNF41Q9H4P4 317 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 CTDP1Q9Y5B0 961 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 TACC3Q9Y6A5 838 aa16.99■□□□□ 0.31
R3HCC1-206ENST00000520480 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 ZNF213O14771 459 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 NMT2O60551 498 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 ZBED4O75132 1171 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 GSPT1P15170 499 aaKnown RBP16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 NOVP48745 357 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 NT5C2P49902 561 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 STAG1Q8WVM7 1258 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 KIFC2Q96AC6 838 aa16.98■□□□□ 0.31
R3HCC1-206ENST00000520480 SLC1A4P43007 532 aa16.97■□□□□ 0.31
R3HCC1-206ENST00000520480 KCTD2Q14681 263 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms