RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 MAPK8IP1Q9UQF2 711 aa5.2□□□□□ -1.58
HMGB1P41-201ENST00000520234 ATP2B1P20020 1258 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 GUCY2CP25092 1073 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 GBP1P32455 592 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 CHMP4BP1P59074 171 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 PRKCQQ04759 706 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 TNNI3KQ59H18 835 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 C22orf34Q6ZV56 151 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 FAM214BQ7L5A3 538 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 LSRQ86X29 649 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 PPP1R13LQ8WUF5 828 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 SREK1Q8WXA9 508 aaKnown RBP5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 ARMC5Q96C12 935 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 ANAPC16Q96DE5 110 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 TANGO6Q9C0B7 1094 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 TPX2Q9ULW0 747 aaKnown RBP5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 SLC12A7Q9Y666 1083 aa5.19□□□□□ -1.58
HMGB1P41-201ENST00000520234 CASP7P55210 303 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 KRTAP10-2P60368 255 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 RNF4P78317 190 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 KCNA10Q16322 511 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 SLC23A3Q6PIS1 610 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 RIN3Q8TB24 985 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 NETO1Q8TDF5 533 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 PARD6AQ9NPB6 346 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 CD320Q9NPF0 282 aa5.18□□□□□ -1.58
HMGB1P41-201ENST00000520234 GNAT3A8MTJ3 354 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 CLEC3AO75596 197 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 UBOX5O94941 541 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 KIR3DL1P43629 444 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 SFRP5Q5T4F7 317 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 ARHGAP27Q6ZUM4 889 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 CDH24Q86UP0 819 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 FBXO15Q8NCQ5 510 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 BAHD1Q8TBE0 780 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 RNF141Q8WVD5 230 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 HEXIM2Q96MH2 286 aaKnown RBP5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 SLC9A7Q96T83 725 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 ASPNQ9BXN1 380 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 PRKAG3Q9UGI9 489 aa5.17□□□□□ -1.58
HMGB1P41-201ENST00000520234 ACRP10323 421 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 BBS9Q3SYG4 887 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 ANGEL2Q5VTE6 544 aaKnown RBP5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 UNC5AQ6ZN44 842 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 RUFY4Q6ZNE9 571 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 PRR23BQ6ZRT6 265 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 TTC6Q86TZ1 520 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 PLD6Q8N2A8 252 aaKnown RBP5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 PIWIL2Q8TC59 973 aaKnown RBP5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 KREMEN1Q96MU8 473 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 PHAXQ9H814 394 aaKnown RBP5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 ZNF408Q9H9D4 720 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 MRVI1Q9Y6F6 885 aa5.16□□□□□ -1.58
HMGB1P41-201ENST00000520234 A0A1W2PQH9 124 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 STK10O94804 968 aaKnown RBP5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 POLR2BP30876 1174 aaKnown RBP5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 ETFBP38117 255 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 OXCT1P55809 520 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 MPZL3Q6UWV2 235 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 MFSD4AQ8N468 514 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 FAM169BQ8N8A8 192 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 SMARCC1Q92922 1105 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 DRC1Q96MC2 740 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 SLC6A18Q96N87 628 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 HIRIP3Q9BW71 556 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 KCNH3Q9ULD8 1083 aa5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 R3HCC1Q9Y3T6 440 aaKnown RBP5.15□□□□□ -1.59
HMGB1P41-201ENST00000520234 A0A0G2JLL6 359 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 FAM155AB1AL88 458 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 SMAD7O15105 426 aaKnown RBP5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 CEACAM5P06731 702 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 GLI1P08151 1106 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 TMEM253P0C7T8 217 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 PMS1P54277 932 aaKnown RBP5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 PPP2R5EQ16537 467 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 NBPF12Q5TAG4 269 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 SOGA3Q5TF21 947 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 TMEM192Q8IY95 271 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 CKAP2LQ8IYA6 745 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 VWCEQ96DN2 955 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 ACTR10Q9NZ32 417 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 SUCOQ9UBS9 1254 aaKnown RBP5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 ZNF214Q9UL59 606 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 SNX11Q9Y5W9 270 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 CAPN6Q9Y6Q1 641 aa5.14□□□□□ -1.59
HMGB1P41-201ENST00000520234 TMEM265A0A087WTH1 108 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 CBX7O95931 251 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 MED14OSP0DP75 135 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 GTF2F1P35269 517 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 CD96P40200 585 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 CLCN7P51798 805 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 RBL2Q08999 1139 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 ZYXQ15942 572 aaKnown RBP5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 IFI16Q16666 785 aaKnown RBP5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 NBPF6Q5VWK0 638 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 ANKS3Q6ZW76 656 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 PRRT2Q7Z6L0 340 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 FAM181AQ8N9Y4 354 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 NBPF4Q96M43 638 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 TNKS2Q9H2K2 1166 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms