RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
VPS37A-206ENST00000520140 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
VPS37A-206ENST00000520140 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
VPS37A-206ENST00000520140 RPAP3Q9H6T3 665 aaPredicted RBP16.63■□□□□ 0.25
VPS37A-206ENST00000520140 MOGSQ13724 837 aa16.62■□□□□ 0.25
VPS37A-206ENST00000520140 FBXL16Q8N461 479 aa16.62■□□□□ 0.25
VPS37A-206ENST00000520140 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
VPS37A-206ENST00000520140 NCOA5Q9HCD5 579 aaKnown RBP16.62■□□□□ 0.25
VPS37A-206ENST00000520140 WDR33Q9C0J8 1336 aaKnown RBP16.62■□□□□ 0.25
VPS37A-206ENST00000520140 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 CETPP11597 493 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
VPS37A-206ENST00000520140 SLC16A2P36021 539 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 KIF23Q02241 960 aaPredicted RBP16.61■□□□□ 0.25
VPS37A-206ENST00000520140 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
VPS37A-206ENST00000520140 ANKRD1Q15327 319 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 SH3D19Q5HYK7 790 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 TTBK2Q6IQ55 1244 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 PTPN18Q99952 460 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 FBXO28Q9NVF7 368 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 BMP3P12645 472 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 ME3Q16798 604 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 LPAR1Q92633 364 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 ALDH8A1Q9H2A2 487 aaPredicted RBP16.61■□□□□ 0.25
VPS37A-206ENST00000520140 HPS5Q9UPZ3 1129 aa16.61■□□□□ 0.25
VPS37A-206ENST00000520140 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
VPS37A-206ENST00000520140 METAP2P50579 478 aaKnown RBP eCLIP16.6■□□□□ 0.25
VPS37A-206ENST00000520140 FASTKD5Q7L8L6 764 aaKnown RBP16.6■□□□□ 0.25
VPS37A-206ENST00000520140 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
VPS37A-206ENST00000520140 MAD2L2Q9UI95 211 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 DDAH1O94760 285 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 CDC27P30260 824 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
VPS37A-206ENST00000520140 NOGQ13253 232 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 GPAT2Q6NUI2 795 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 PROCA1Q8NCQ7 364 aaPredicted RBP16.6■□□□□ 0.25
VPS37A-206ENST00000520140 GMCL1Q96IK5 515 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 C12orf42Q96LP6 360 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 LIMCH1Q9UPQ0 1083 aa16.6■□□□□ 0.25
VPS37A-206ENST00000520140 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
VPS37A-206ENST00000520140 IGF2BP3O00425 579 aaKnown RBP eCLIP16.59■□□□□ 0.25
VPS37A-206ENST00000520140 WDR46O15213 610 aaKnown RBP16.59■□□□□ 0.25
VPS37A-206ENST00000520140 FLOT1O75955 427 aa16.59■□□□□ 0.25
VPS37A-206ENST00000520140 SNHG28P0DPA3 235 aa16.59■□□□□ 0.25
VPS37A-206ENST00000520140 ZNF543Q08ER8 600 aa16.59■□□□□ 0.25
VPS37A-206ENST00000520140 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
VPS37A-206ENST00000520140 PIBF1Q8WXW3 757 aa16.59■□□□□ 0.25
VPS37A-206ENST00000520140 SYNPO2Q9UMS6 1093 aa16.59■□□□□ 0.25
VPS37A-206ENST00000520140 AGTPBP1Q9UPW5 1226 aa16.59■□□□□ 0.25
VPS37A-206ENST00000520140 PDHXO00330 501 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 CYP2C8P10632 490 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 EVCP57679 992 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 GRM4Q14833 912 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 RTN1Q16799 776 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 NBPF11Q86T75 865 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 KIFC2Q96AC6 838 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 ZNF274Q96GC6 653 aaPredicted RBP16.58■□□□□ 0.25
VPS37A-206ENST00000520140 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.25
VPS37A-206ENST00000520140 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.25
VPS37A-206ENST00000520140 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
VPS37A-206ENST00000520140 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
VPS37A-206ENST00000520140 CALM1P0DP23 149 aa16.58■□□□□ 0.24
VPS37A-206ENST00000520140 CALM2P0DP24 149 aa16.58■□□□□ 0.24
VPS37A-206ENST00000520140 CALM3P0DP25 149 aa16.58■□□□□ 0.24
VPS37A-206ENST00000520140 SNAP25P60880 206 aa16.58■□□□□ 0.24
VPS37A-206ENST00000520140 SCRN1Q12765 414 aa16.58■□□□□ 0.24
VPS37A-206ENST00000520140 PEX10O60683 326 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 STAT2P52630 851 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 CATSPERGQ6ZRH7 1159 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 FAM217BQ9NTX9 383 aaPredicted RBP16.57■□□□□ 0.24
VPS37A-206ENST00000520140 PARP14Q460N5 1801 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 hCG_1642624A0A1W2PR95 340 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 PALM3A6NDB9 673 aaPredicted RBP16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L15C9J2P7 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L13C9JLJ4 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L11C9JVI0 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L18D6R9N7 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L22D6RA61 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L17D6RBQ6 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L19D6RCP7 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L20D6RJB6 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 KIF5BP33176 963 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 IRX3P78415 501 aaPredicted RBP16.57■□□□□ 0.24
VPS37A-206ENST00000520140 USP17L24Q0WX57 530 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 ASPRV1Q53RT3 343 aa16.57■□□□□ 0.24
VPS37A-206ENST00000520140 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
VPS37A-206ENST00000520140 SREBF2Q12772 1141 aa16.56■□□□□ 0.24
VPS37A-206ENST00000520140 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
VPS37A-206ENST00000520140 IFNL1Q8IU54 200 aa16.56■□□□□ 0.24
VPS37A-206ENST00000520140 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
VPS37A-206ENST00000520140 TMX3Q96JJ7 454 aa16.56■□□□□ 0.24
VPS37A-206ENST00000520140 P2RX7Q99572 595 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms